Pyrlo_00120 : CDS information

Location

Organism	Actinosporangium vitaminophilum
Strain	ATCC 31673 (=NBRC 14294)
Entry name	Pyrrolomycin
Contig	EF140901
Start / Stop / Direction	14,602 / 13,733 / - [in whole cluster] 14,602 / 13,733 / - [in contig]
Location	complement(13733..14602) [in whole cluster] complement(13733..14602) [in contig]
Type	CDS
Length	870 bp (289 aa)

Annotation

Category	5.4 hypothetical protein
Product	hypothetical protein
Product (GenBank)	hypothetical membrane protein
Gene
Gene (GenBank)	pyr12
EC number
Keyword
Note
Note (GenBank)
Reference	ACC A3R4Q3 PmId [17158935] Cloning and characterization of the pyrrolomycin biosynthetic gene clusters from Actinosporangium vitaminophilum ATCC 31673 and Streptomyces sp. strain UC 11065. (Antimicrob Agents Chemother. , 2007) comment pyrrolomycin biosynthetic gene clustersに関する文献。 pyr12(289 a.a.): unknown pyr12自体の機能実験は行われていないが、membrane transport protein DedAとの相同性が低いながらもあるとの記載有り。pyrrolomycinに対する自己耐性への可能性が記載されている。

Sequence

>hypothetical protein [hypothetical membrane protein]
MVIRARPDDIPVTHPASGEPDGAGTSRTPATPAPREHTCSTGTARQALRDRGHTHRGDDA
RRAPGPRRTRGGDVPMDQIVDRLLALPAWLTLILVFLLPALEAAAFPGVLLPSQSAVMAG
GVLAYHGSAPIGAVLVAAVLGAVVGPGVGYLVGQRCGALMVARVPEWLVKSADLARAEDL
LRRLGGAAVVAARFFVGLRTVVPVLSGTARLPYRRFLAWNALAGTIWGVGWGLAGFAAGD
TWQRIGESTGQVAGALLALALVALLVRALVRRRLDDHAGPSAHQPPAPH

>hypothetical protein [hypothetical membrane protein]
ATGGTGATCCGAGCACGTCCGGACGACATCCCCGTGACGCACCCCGCCAGCGGCGAGCCG
GACGGGGCGGGCACCTCTCGCACCCCAGCCACACCCGCACCACGCGAACACACCTGCAGC
ACAGGCACTGCGCGGCAGGCACTGCGCGACAGAGGTCATACGCACCGCGGAGACGATGCG
CGGCGGGCACCGGGCCCGCGGCGCACTCGGGGAGGCGATGTCCCGATGGACCAGATCGTC
GACCGTCTGCTGGCCCTACCGGCGTGGCTCACCCTGATCCTGGTCTTCCTGCTGCCCGCG
CTCGAGGCGGCAGCGTTCCCCGGCGTCCTGCTGCCCAGCCAGTCCGCGGTGATGGCCGGC
GGAGTCCTCGCCTACCACGGCAGCGCGCCGATCGGCGCGGTGCTGGTCGCCGCCGTGCTC
GGTGCGGTGGTCGGGCCGGGGGTCGGCTACCTGGTCGGCCAGCGGTGCGGGGCGCTGATG
GTCGCGCGGGTACCCGAGTGGCTGGTCAAGTCCGCGGACCTGGCCAGGGCCGAGGACCTG
CTGCGCCGCCTCGGTGGCGCCGCCGTGGTCGCTGCCCGTTTCTTCGTCGGCCTGCGCACC
GTGGTTCCGGTGCTCAGCGGCACCGCCCGACTGCCCTACCGACGGTTCCTGGCCTGGAAC
GCCCTCGCCGGCACGATATGGGGCGTGGGCTGGGGACTGGCGGGATTCGCCGCGGGGGAC
ACCTGGCAGCGGATCGGGGAGTCCACCGGGCAGGTGGCGGGAGCGCTGTTGGCGCTGGCG
CTGGTGGCGCTGCTGGTCCGTGCGCTGGTGCGGCGGCGGCTGGACGACCACGCCGGGCCC
TCCGCCCACCAGCCGCCCGCCCCGCACTGA

Feature

BLASTP Database:UniProtKB:2011_09	show BLAST table
InterPro Database:interpro:38.0	IPR015414 SNARE associated Golgi protein (Family) PF09335 SNARE_assoc
SignalP	No significant hit
TMHMM	Transmembrane 4

Pyrlo_00110 Pyrlo_00130