Rimoc_00090 : CDS information

Location

Organism	Streptomyces diastaticus
Strain	108
Entry name	Rimocidin
Contig	AY442225
Start / Stop / Direction	16,367 / 14,688 / - [in whole cluster] 16,367 / 14,688 / - [in contig]
Location	complement(14688..16367) [in whole cluster] complement(14688..16367) [in contig]
Type	CDS
Length	1,680 bp (559 aa)

Annotation

Category	5.1 general function
Product	putative transposase
Product (GenBank)	ORF1
Gene
Gene (GenBank)	orf1
EC number
Keyword
Note	This ORF is not involved in polyene productions.
Note (GenBank)	transposase
Reference	ACC Q6T2B8 PmId [15123265] Starter unit choice determines the production of two tetraene macrolides, rimocidin and CE-108, in Streptomyces diastaticus var. 108. (Chem Biol. , 2004) comment Streptomyces diastaticus var. 108におけるrimocidin と CE-108の二つのtetraene macrolidesの生産に関する文献。 ORF1; transposase 相同性よりtransposaseと予想している。 ORF1不活化変異株において、polyeneの生産には何の影響も及ぼさないことが確認されている。

Sequence

>putative transposase [ORF1]
MSMRPSGPGEIPAETVRVARAAFAKGSLAIRVRDELGPMFRDEDFADLFASRGRPAWSPA
GLALVSVLQFVDGLTDRQAAEAVRARIDFKYALGLELGDPGFDFSVLSEFRDRLAGADGG
RRVMDGVLVAAREKGLLKSAGRARTDSTHILSSARQLNWLELVAETLRSALNALAQAAPG
WLAEAAEPDWFRHYATRAEESRFPKGRARRDEVGLRIGRDGMRLLEEVFATVAPHRLRAL
DEVEILRQVWVQHFHMVEGEVARRDPKDRPPGMMRLVTPYDREARGSVKRDIMWDGYKVH
LTEICEADAPNLITNVATTVATVSDSVMSQSIHAGLADRDCLPGEHWVDAGYPTATQVLA
ARTEHGVALHGPMAANTSAQSAGPYGLDAFTVDWDQQQVACPGGVTTTQWYPRTDSKGLA
VIRVRFRHSECRPCPHRHECVGSATGQRREIMLRHREEHEIIRHSRAEQQTDAWKDRYKI
RAGVEGSISQAVGRCGLRRSRYRGLTKTSLQHQLTGAAINLARIDAHLTGTPRARTRTSH
FAALCPAEMTLDGAQAGTE

>putative transposase [ORF1]
ATGTCGATGCGTCCGAGTGGGCCGGGGGAGATTCCGGCGGAGACGGTGCGGGTGGCCCGG
GCGGCGTTTGCGAAGGGAAGCCTGGCGATCCGGGTCCGGGACGAGCTGGGGCCGATGTTC
CGGGACGAGGACTTCGCGGATCTGTTCGCCTCACGAGGCCGGCCTGCCTGGTCTCCGGCC
GGTCTGGCGCTGGTGTCGGTGCTCCAGTTCGTGGACGGGCTGACCGACCGCCAGGCCGCG
GAAGCGGTGCGGGCGCGGATCGACTTCAAGTACGCCCTCGGGCTGGAACTGGGCGATCCC
GGCTTCGACTTCTCGGTGCTGTCGGAGTTCAGGGACCGGCTGGCCGGGGCCGATGGAGGG
CGCCGGGTCATGGACGGTGTGCTGGTGGCAGCCCGCGAGAAGGGGCTGCTCAAGAGCGCG
GGCCGGGCCCGCACCGACTCCACGCACATCTTGTCCTCGGCACGGCAGCTGAACTGGCTG
GAGCTGGTCGCGGAGACGCTGCGATCGGCTCTGAACGCACTGGCCCAGGCTGCCCCCGGC
TGGCTGGCCGAAGCCGCCGAGCCGGACTGGTTCCGGCACTACGCGACCCGGGCCGAGGAG
TCCCGGTTCCCCAAGGGCCGTGCCAGGCGGGACGAGGTGGGCCTGCGGATCGGCAGGGAC
GGGATGCGGCTGCTGGAGGAGGTCTTCGCCACCGTTGCACCGCACCGGCTTCGCGCACTC
GATGAGGTGGAGATCCTGCGGCAGGTCTGGGTCCAGCACTTCCACATGGTGGAGGGCGAG
GTGGCCAGGCGGGACCCAAAAGACCGTCCGCCGGGCATGATGCGCCTGGTCACCCCGTAT
GACCGCGAGGCCCGTGGCAGCGTGAAGCGGGACATCATGTGGGACGGCTACAAGGTCCAT
CTCACCGAGATCTGCGAGGCGGACGCCCCGAACCTGATCACGAACGTGGCCACCACCGTC
GCCACCGTCTCGGACAGCGTGATGAGCCAGTCGATCCACGCGGGCCTCGCCGACCGCGAC
TGCCTGCCCGGCGAACACTGGGTCGATGCCGGTTATCCCACCGCCACTCAAGTCCTGGCC
GCCCGCACCGAGCATGGCGTCGCGCTGCACGGGCCCATGGCTGCCAACACGTCCGCCCAG
TCCGCGGGCCCCTACGGCCTGGACGCATTCACCGTCGACTGGGACCAGCAGCAGGTGGCC
TGCCCCGGCGGCGTCACCACGACCCAGTGGTATCCGCGCACGGACTCCAAGGGCCTCGCG
GTCATCCGCGTGCGGTTCCGCCACAGCGAGTGTCGCCCCTGTCCCCACCGGCACGAGTGC
GTGGGCTCGGCTACCGGCCAGCGCCGGGAGATCATGCTGCGTCACCGGGAGGAACACGAG
ATCATCCGACACAGCCGCGCCGAGCAGCAAACCGATGCCTGGAAGGACCGTTACAAGATC
CGTGCCGGGGTCGAGGGCAGCATCTCCCAAGCAGTCGGGCGCTGCGGCCTGCGCAGATCC
CGCTACCGGGGCCTGACAAAGACCAGCCTCCAGCACCAGCTCACCGGAGCCGCGATCAAC
CTTGCCCGCATCGACGCCCACCTCACCGGCACACCCCGAGCCCGCACCCGCACCAGCCAC
TTCGCAGCACTGTGCCCCGCCGAGATGACGCTCGACGGGGCACAAGCAGGGACCGAATAA

Feature

BLASTP Database:UniProtKB:2011_09	show BLAST table
InterPro Database:interpro:38.0	IPR008490 Transposase InsH, N-terminal (Domain) PF05598 DUF772
SignalP	Eukaryota Bacteria, Gram-negative Bacteria, Gram-positive
TMHMM	No significant hit

Rimoc_00080 Rimoc_00100