Stref_00170
Stref_00180 : CDS information
Location
| Organism | Streptomyces steffisburgensis |
|---|---|
| Strain | NRRL 3193 (=NBRC 13446) |
| Entry name | Steffimycin |
| Contig | AM156932 |
| Start / Stop / Direction | 17,840 / 15,984 / - [in whole cluster] 17,840 / 15,984 / - [in contig] |
| Location | complement(15984..17840) [in whole cluster] complement(15984..17840) [in contig] |
| Type | CDS |
| Length | 1,857 bp (618 aa) |
Annotation
| Category | 5.2 function unknown |
|---|---|
| Product | SNF2 family protein |
| Product (GenBank) | SNF2 related domain |
| Gene | |
| Gene (GenBank) | stfD |
| EC number | |
| Keyword | |
| Note | |
| Note (GenBank) | |
| Reference |
|
| Family/Domain |
Sequence
>SNF2 family protein [SNF2 related domain] MPELPGRLQATFVPAEGAMAWWGVADLDGAVREYGLPVGRTGTCRLALPETDHVAPATVD VRYADLDTALPALRALDPDREAYSASLRAWRDAAVLSDAGDEPFAELSARMPAAAHAVLN PEESAVTSAAALLGQFRQVVATRGVLRSTTVRAELRPYQMHGVAWLRSVPGRGGGAVLAD EMGLGKTLQAICLLATRSEGGPHLVVCPTSLVGNWVRELARFSPATPVVAYHGPRRSLPD TFEAGTVVVTSYPVLRTDEALEKTQWDVAVFDEAQQIKNPDALVSKAAARLSAEVRIAMT GTPVENRLEELWSILNVTSPGLLGSRARFRQRFAAPIEQRRSVSAASALHALVSPHMLRR TKAEVVAELPAKQYSTVVCTLTGEQVRLYREAVDRAFDEGLGGGIERRGRVLALLTSLKQ ICNHPAQYLREEAAGTGRSGKFDRAAEMLAEIVDDGDRALVFTQYRVMGDLLAGHLSQHL GTGPIPFLHGGLSPDKRDRLVHDFQESDDAPPVLLLSLRAAGFGLNLTRANHVMHYDRWW NPAVEEQATDRAHRIGQQRTLNVHALVTGGTIEDHIAQMHETKRGFADVVSGNTEAALAE LSDEELHAVLDLDLGALT
>SNF2 family protein [SNF2 related domain] GTGCCTGAGCTGCCCGGCCGACTGCAAGCCACCTTCGTACCGGCCGAGGGGGCGATGGCC TGGTGGGGCGTGGCCGATCTGGACGGCGCGGTACGGGAGTACGGCCTGCCGGTGGGACGC ACCGGCACCTGCCGCCTCGCGCTGCCGGAAACGGATCACGTGGCCCCGGCGACCGTCGAC GTCCGGTACGCCGACCTGGACACCGCACTTCCCGCTCTGCGCGCCCTGGACCCGGACCGG GAGGCGTACAGCGCCTCGCTGCGGGCGTGGCGCGACGCCGCCGTGCTGTCCGACGCGGGT GATGAGCCCTTCGCCGAGCTGAGCGCCCGGATGCCGGCGGCCGCCCATGCGGTGCTCAAC CCCGAGGAGAGCGCTGTCACTTCGGCGGCCGCTCTGCTGGGCCAGTTCCGCCAGGTGGTG GCCACCCGGGGCGTGCTGCGGTCGACGACCGTGCGGGCCGAGCTGAGGCCCTACCAGATG CACGGTGTGGCTTGGCTGCGCTCCGTGCCCGGCCGGGGCGGAGGGGCCGTCCTGGCCGAT GAGATGGGTCTGGGGAAGACGCTCCAGGCGATCTGTCTGCTGGCCACACGCTCGGAGGGC GGCCCGCACCTCGTCGTCTGCCCGACCTCGCTGGTCGGCAACTGGGTCCGCGAACTGGCC CGCTTCTCCCCGGCGACACCTGTGGTCGCCTACCACGGACCGCGCCGGAGTCTGCCGGAC ACCTTCGAGGCCGGAACCGTGGTGGTGACCAGCTATCCGGTGCTCCGCACGGACGAGGCG CTGGAGAAGACCCAGTGGGACGTGGCCGTCTTCGACGAGGCGCAGCAGATCAAGAATCCC GACGCGCTGGTCAGCAAGGCCGCCGCCCGGCTGTCCGCCGAGGTGCGGATCGCCATGACC GGTACCCCGGTGGAGAACCGGCTCGAAGAGCTGTGGTCCATCCTCAACGTGACGAGCCCC GGCCTGCTGGGCAGCCGTGCCCGGTTCCGGCAGCGGTTCGCGGCGCCCATCGAGCAGCGC CGCTCGGTGAGCGCCGCGAGCGCGCTGCACGCGCTCGTCTCCCCGCACATGCTCCGGCGC ACCAAGGCCGAAGTCGTCGCGGAACTGCCCGCCAAGCAGTACTCGACGGTCGTCTGCACA CTGACCGGCGAGCAGGTCCGGCTCTACCGCGAGGCCGTCGACCGGGCCTTCGACGAGGGG CTCGGCGGGGGCATCGAGCGCCGGGGCCGGGTCCTGGCCCTGCTCACCTCGCTCAAGCAG ATCTGCAATCACCCCGCCCAGTACCTGCGGGAGGAAGCCGCGGGGACCGGCCGTTCCGGC AAGTTCGACCGGGCAGCCGAAATGCTGGCCGAGATCGTCGACGACGGCGACCGCGCCCTG GTGTTCACCCAGTACCGGGTCATGGGGGACCTGCTGGCCGGCCACCTCTCACAACACCTC GGCACCGGGCCGATCCCGTTCCTGCACGGCGGGCTGTCCCCCGACAAGCGAGACCGGCTC GTGCACGACTTCCAGGAGAGCGACGACGCGCCGCCCGTCCTGCTGCTGAGCCTGCGCGCC GCGGGGTTCGGACTCAACCTGACACGGGCCAACCACGTGATGCACTACGACCGCTGGTGG AACCCGGCAGTGGAGGAACAGGCAACCGACCGGGCGCACCGGATCGGCCAGCAGCGCACC CTCAACGTCCACGCCCTCGTCACCGGGGGCACCATCGAGGACCACATCGCCCAGATGCAC GAGACCAAACGCGGGTTCGCCGACGTCGTCTCCGGCAACACCGAAGCCGCCCTGGCCGAG CTGTCCGACGAAGAACTGCACGCCGTACTGGATCTCGACCTGGGAGCCCTCACCTGA
Feature
| BLASTP Database:UniProtKB:2011_09 |
|
|---|---|
| InterPro Database:interpro:38.0 |
IPR000330 SNF2-related (Domain)
IPR001650 Helicase, C-terminal (Domain)
IPR014001 Helicase, superfamily 1/2, ATP-binding domain (Domain)
|
| SignalP |  ![[1-20] 0.244 Signal](../../img/R.gif "[1-20] 0.244 Signal"){kind=small} |
| TMHMM | No significant hit |
![[158-426] 2.19999999999997e-63 PF00176](../../img/H.gif "[158-426] 2.19999999999997e-63 PF00176"){kind=small}
![[444-602] PS51194](../../img/M.gif "[444-602] PS51194"){kind=small}
