Strply_00230
Strply_00240 : CDS information
Location
| Organism | Streptomyces lydicus |
|---|---|
| Strain | NRRL 2433 (=NBRC 13058) |
| Entry name | Streptolydigin |
| Contig | FN433113 |
| Start / Stop / Direction | 29,625 / 31,172 / + [in whole cluster] 29,625 / 31,172 / + [in contig] |
| Location | 29625..31172 [in whole cluster] 29625..31172 [in contig] |
| Type | CDS |
| Length | 1,548 bp (515 aa) |
Annotation
| Category | 4.3 transport |
|---|---|
| Product | putative drug resistance transporter |
| Product (GenBank) | putative transport integral membrain protein |
| Gene | |
| Gene (GenBank) | slgT |
| EC number | |
| Keyword | |
| Note | |
| Note (GenBank) | |
| Reference |
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| Related Reference |
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Sequence
>putative drug resistance transporter [putative transport integral membrain protein] MPRRPASTSAERRKRSDMTQATAASTTRQARFRWWGLAVIGIAQLMVMLDTTIVNIALPW AQRATGMSDADRQWVITAYTLAFGGLLLLGGRIGDLIGRKRAFVIAVAGFTAASAAGGAA PTAAILVGSRAAQGLFAALLIPATLAMLTTTFTEPRERAKAFGVFSSVAAAGGALGLLCG GVITQYLDWRWCLYVNVPIGVLVAVGAWLLLPGLPAQRGVRIDVPGAVLSSGGMVALVYG FSEAADEGWGSGRVVGLLVAALVLLTAFVALQAKVRDPLLPLRVLAERNRAGGFLTIALA MVGMFGLFLIMTYQLQVVMHYSPARAGLALLPATLATVLTTTQVTARLMPRVPVRLLVAP GLLLAAAGLFNLGRLTPESPYASTLLPTQILLGAGLGLVMTPCVNIATNKVPPADVGVVS AFVSTSQQIGGSIGTALLNTIATSVTATALASRAPGAAATAEATVHGYAVASLWAGGILL VTAVVAAVLIKVDLRTPAPAKAPAAPAKEEVAPGT
>putative drug resistance transporter [putative transport integral membrain protein] GTGCCGCGCCGGCCTGCGTCAACGAGCGCGGAAAGACGAAAGAGGAGCGACATGACGCAA GCGACCGCGGCCTCGACCACGAGGCAGGCGCGCTTCCGGTGGTGGGGCCTGGCGGTGATC GGGATCGCCCAGCTGATGGTCATGCTGGACACCACGATCGTGAACATCGCCCTTCCCTGG GCGCAGCGGGCCACGGGCATGTCGGACGCGGACCGGCAATGGGTGATCACCGCCTACACC CTCGCCTTCGGCGGACTGCTGCTCCTGGGCGGCCGGATCGGCGACCTCATCGGGCGCAAG CGGGCCTTCGTCATCGCGGTCGCCGGATTCACCGCCGCCTCCGCGGCCGGCGGCGCCGCG CCGACCGCCGCGATCCTGGTCGGCTCCCGCGCCGCACAGGGACTCTTCGCCGCGCTCCTG ATCCCCGCGACCCTCGCGATGCTCACCACGACGTTCACCGAGCCCCGGGAGCGCGCCAAG GCGTTCGGCGTCTTCAGCTCGGTGGCCGCGGCCGGCGGAGCGCTGGGTCTGCTCTGCGGC GGCGTGATCACCCAATACCTCGACTGGCGCTGGTGCCTGTACGTCAACGTCCCCATCGGG GTCCTGGTGGCCGTCGGCGCCTGGCTGCTGCTGCCCGGTCTGCCGGCCCAGCGGGGCGTG CGGATCGACGTCCCCGGCGCGGTGCTCTCCAGCGGCGGCATGGTGGCGCTGGTCTACGGC TTCAGCGAGGCCGCGGACGAGGGCTGGGGCTCGGGCCGGGTGGTCGGCCTGCTGGTGGCC GCGCTGGTGCTGCTGACCGCCTTCGTGGCGCTCCAGGCCAAGGTCCGCGATCCCCTGCTG CCGCTGCGGGTGCTGGCCGAACGCAACCGCGCCGGCGGCTTCCTCACCATCGCGCTGGCC ATGGTCGGCATGTTCGGGCTGTTCCTGATCATGACCTACCAGCTCCAGGTGGTCATGCAC TACTCACCGGCCCGTGCCGGGCTGGCGCTGCTCCCGGCGACCCTGGCGACGGTGCTCACC ACGACCCAGGTCACCGCCCGGCTCATGCCGCGGGTGCCGGTGCGGCTGCTGGTGGCGCCG GGCCTGCTGCTGGCCGCGGCCGGACTGTTCAACCTCGGCCGGCTGACCCCGGAGAGCCCG TACGCGTCGACGCTGCTGCCCACCCAGATCCTGCTCGGCGCCGGACTGGGCCTGGTGATG ACGCCGTGCGTCAACATCGCGACGAACAAGGTGCCGCCCGCCGACGTCGGTGTCGTCTCG GCGTTCGTCAGCACCTCGCAGCAGATCGGCGGCTCCATCGGGACGGCGCTGCTCAACACC ATCGCGACGAGCGTGACGGCCACCGCCCTGGCCTCCCGGGCGCCCGGAGCCGCGGCCACC GCGGAGGCGACCGTGCACGGCTACGCGGTGGCGAGCCTGTGGGCCGGCGGGATCCTGCTG GTCACCGCGGTCGTCGCGGCGGTCCTGATCAAGGTCGACCTGCGGACGCCGGCTCCGGCC AAGGCGCCGGCCGCGCCCGCCAAGGAGGAAGTCGCCCCGGGCACCTGA
Feature
| BLASTP Database:UniProtKB:2011_09 |
|
|---|---|
| InterPro Database:interpro:38.0 |
IPR004638 Drug resistance transporter EmrB/QacA subfamily (Family)
IPR011701 Major facilitator superfamily (Family)
IPR016196 Major facilitator superfamily domain, general substrate transporter (Domain)
IPR020846 Major facilitator superfamily domain (Domain)
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| SignalP |  ![[1-1] Signal-anchor](../../img/M.gif "[1-1] Signal-anchor"){kind=small} |
| TMHMM | ![[32-54] Transmembrane (i-o)](../../img/C.gif "[32-54] Transmembrane (i-o)"){kind=small} ![[74-96] Transmembrane (o-i)](../../img/G.gif "[74-96] Transmembrane (o-i)"){kind=small} |
![[39-448] 2.59999999999995e-76 TIGR00711](../../img/T.gif "[39-448] 2.59999999999995e-76 TIGR00711"){kind=small}
![[41-435] 1.99999999999999e-45 PF07690](../../img/H.gif "[41-435] 1.99999999999999e-45 PF07690"){kind=small}
![[1-499] 1.59998835313644e-67 SSF103473](../../img/B.gif "[1-499] 1.59998835313644e-67 SSF103473"){kind=small}
