Virg_00250
Virg_00260 : CDS information
Location
| Organism | Streptomyces virginiae |
|---|---|
| Strain | MAFF 10-06014 |
| Entry name | Virginiamycin |
| Contig | AB253363 |
| Start / Stop / Direction | 89,546 / 87,834 / - [in whole cluster] 1 / 1,713 / + [in contig] |
| Location | complement(87834..89546) [in whole cluster] 1..1713 [in contig] |
| Type | CDS |
| Length | 1,713 bp (570 aa) |
Annotation
| Category | 2.2 modification addition of starter unit |
|---|---|
| Product | putative branched-chain alpha-keto acid dehydrogenase E2 component |
| Product (GenBank) | dihydrolopoamide acyltransferase |
| Gene | bkdB bkdC |
| Gene (GenBank) | bkdB |
| EC number | 2.3.1.- |
| Keyword |
|
| Note | |
| Note (GenBank) | |
| Reference |
|
Sequence
>putative branched-chain alpha-keto acid dehydrogenase E2 component [dihydrolopoamide acyltransferase] MSEKKTTTTLTVPRLGEGIVEVLILRLLKQPGDLVAKDELLYEMEHDKASLEIESPTAGR LTAWLVEEGRRVPIGGAVAEIEPVAETEAVAGTGAPAEPGAAADGAGPAPAPAQGASPAG PPGQPRTGTVRIPPRTRAHARRLGLDETVLATLVPARGRSLMPADLERHVADRACAAPEP QQVRLQARSQDPVEGAKPVTPAPLTGAGHDFTDRPVSRRQKELNRALRSGTGDVVPAVVA TEVREELLASALRARRAAGDGQSFTTAFQVFAHLAARVAADFPFLRSRRLGEDHLRVFDH VDLGIACAGEDGDLTIGVVRGSDLLDADRFDERYADAVERALGGESQADGRVTLMLSHLG DQGATFAVPVVVPPAAATLFLGAPSGSGPKAVRRIVLAFDHTVFNGQEAARFLDALRAEL AQAGEPEAPVPAATNDRTRADGQQAREVRESALERLTALASEVADHAVDPDRPLGEQGID SAKALRLTREAGRIFGTKLPATAIWKYPTLRALAELLPQTAPGEAPSNPAHADRADRAGR VRAGRVRSGHVRSGHVRAGSGGRSGCPRAG
>putative branched-chain alpha-keto acid dehydrogenase E2 component [dihydrolopoamide acyltransferase] ATGAGCGAGAAGAAGACGACGACCACCTTGACCGTCCCGCGACTGGGGGAGGGGATCGTC GAAGTCCTGATCCTGCGTCTGCTGAAGCAGCCCGGTGACCTCGTCGCCAAGGACGAACTG CTCTACGAGATGGAGCACGACAAGGCTTCCCTGGAGATCGAGTCGCCGACGGCCGGCAGG CTGACCGCCTGGCTGGTCGAAGAGGGCCGACGGGTGCCGATCGGCGGAGCCGTCGCCGAG ATCGAGCCGGTCGCCGAGACCGAGGCGGTCGCCGGGACCGGAGCACCCGCCGAGCCGGGC GCAGCCGCCGACGGCGCAGGCCCGGCTCCCGCACCCGCGCAGGGCGCGTCGCCCGCCGGA CCGCCCGGACAGCCCCGGACCGGCACCGTCCGCATCCCGCCCCGCACCCGGGCCCACGCC CGCAGGCTGGGCCTGGACGAGACGGTCCTGGCGACCTTGGTTCCCGCCCGGGGGCGCAGC CTGATGCCGGCCGACCTGGAGCGCCACGTCGCCGACCGCGCCTGCGCCGCCCCCGAGCCG CAGCAGGTCCGGCTCCAGGCCCGGTCCCAGGACCCGGTCGAGGGCGCGAAGCCCGTCACC CCGGCGCCGCTCACCGGCGCCGGCCACGACTTCACCGACCGGCCCGTCAGCCGGCGTCAG AAGGAGCTCAACCGGGCGCTGCGTTCCGGCACCGGTGACGTGGTGCCTGCCGTCGTGGCC ACCGAGGTCCGGGAAGAACTCCTCGCGAGCGCGCTGCGCGCCCGCCGCGCCGCCGGCGAC GGCCAGAGCTTCACCACCGCCTTCCAGGTCTTCGCACACCTGGCTGCCCGTGTCGCCGCC GACTTCCCGTTCCTGAGGTCGCGCCGCCTGGGCGAGGACCACCTGCGCGTCTTCGACCAC GTGGACCTGGGCATCGCCTGTGCCGGTGAGGACGGTGATCTGACGATCGGCGTGGTGCGC GGCTCCGACCTGCTGGACGCCGACCGGTTCGACGAGCGCTACGCCGACGCCGTCGAGCGC GCCCTCGGCGGCGAGTCCCAGGCCGACGGCCGGGTCACCCTGATGCTCTCCCACCTCGGC GACCAGGGCGCGACCTTCGCCGTCCCCGTCGTCGTGCCGCCCGCCGCCGCCACGCTGTTC CTCGGAGCGCCGTCCGGCAGCGGGCCCAAGGCGGTCCGCCGGATCGTTCTGGCATTCGAC CACACCGTGTTCAACGGCCAGGAGGCCGCCCGCTTCCTGGACGCCCTGCGGGCCGAGCTC GCACAGGCCGGTGAACCGGAGGCACCCGTCCCGGCCGCGACGAACGACCGGACCCGGGCC GACGGACAGCAGGCCAGGGAGGTCCGGGAGAGCGCGCTGGAGCGGCTCACGGCTCTCGCG AGCGAGGTGGCCGACCACGCGGTGGATCCCGACCGCCCGCTCGGCGAGCAGGGCATCGAC TCCGCCAAGGCCCTGCGCCTGACCCGTGAAGCGGGCCGGATCTTCGGGACCAAGCTGCCC GCCACCGCGATCTGGAAGTACCCGACCCTGCGGGCCCTCGCCGAGCTGCTCCCGCAGACC GCACCCGGCGAGGCGCCCTCGAACCCCGCCCACGCCGATCGCGCCGATCGCGCCGGTCGC GTCCGTGCCGGTCGCGTCCGTAGCGGCCACGTCCGTAGCGGCCACGTCCGTGCCGGTTCC GGTGGCCGTTCCGGATGCCCGCGGGCCGGCTGA
Feature
| BLASTP Database:UniProtKB:2011_09 |
|
|---|---|
| InterPro Database:interpro:38.0 |
IPR000089 Biotin/lipoyl attachment (Domain)
IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain (Domain)
IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site (Binding_site)
IPR009081 Acyl carrier protein-like (Domain)
IPR011053 Single hybrid motif (Domain)
IPR023213 Chloramphenicol acetyltransferase-like domain (Domain)
|
| SignalP |  ![[1-36] 0.167 Signal](../../img/R.gif "[1-36] 0.167 Signal"){kind=small} |
| TMHMM | No significant hit |
![[8-81] PS50968](../../img/M.gif "[8-81] PS50968"){kind=small}
![[9-81] 1.6e-13 PF00364](../../img/H.gif "[9-81] 1.6e-13 PF00364"){kind=small}
![[32-61] PS00189](../../img/P.gif "[32-61] PS00189"){kind=small}
![[444-535] 6.69999687625999e-14 SSF47336](../../img/B.gif "[444-535] 6.69999687625999e-14 SSF47336"){kind=small}
![[451-519] 8.60000000000001e-13 G3DSA:1.10.1200.10](../../img/X2.gif "[451-519] 8.60000000000001e-13 G3DSA:1.10.1200.10"){kind=small}
