Rever_00030 Rever_00030   Rever_00050 Rever_00050

Rever_00040 : CDS information

close this sectionLocation

Organism
StrainSN-593
Entry nameReveromycin
Contig
Start / Stop / Direction3,134 / 3,793 / + [in whole cluster]
3,134 / 3,793 / + [in contig]
Location3134..3793 [in whole cluster]
3134..3793 [in contig]
TypeCDS
Length660 bp (219 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category
Product
Product (GenBank)putative transcriptional regulator
Gene
Gene (GenBank)
EC number
Keyword
Note
  • This ORF is not involved in reveromycin biosynthesis.
Note (GenBank)
  • orf-1
Reference
ACC
PmId
[21642985] Reveromycin A biosynthesis uses RevG and RevJ for stereospecific spiroacetal formation. (Nat Chem Biol. , 2011)
comment
Δorf1及びΔorf(-1)はreveromycinの生産に影響しなかった。従って、これらの遺伝子はreveromycinの生産に関与していないと考えられる。また、これらの遺伝子の上流領域にあるorf(-2)-orf(-4)及び下流領域にあるorf(2)-orf(8)も、配列解析により、reveromycinの生合成に関与しないと予想される。

close this sectionSequence

selected fasta
>[putative transcriptional regulator]
MKGVAARLHVGARIRHALWVGEIVPGQRLVEQDLADRLEVTRSSVREALLDLASDDLVEL
VPNRGARIRVVSVEEAVQITECRSALERLCARKAAERVTPEQRAALAEVGEQLRTAVAEG
ALEAYSTLNRRLHDLIIEFSGQAVARRQLERLNTQMVRFQFRLAMRPGRPQESLPQLLAI
VDAVGSGDPDAADKAAEAQLAGVIAQLRASDPPAALSGW
selected fasta
>[putative transcriptional regulator]
ATGAAGGGAGTCGCCGCGCGGCTCCACGTCGGCGCCCGGATCCGCCACGCCCTGTGGGTC
GGCGAGATCGTCCCCGGGCAGCGGCTGGTGGAACAGGACCTGGCCGACCGGCTGGAGGTC
ACCCGCAGCTCCGTCCGCGAGGCGCTGCTCGACCTCGCCTCGGACGACCTGGTGGAGCTG
GTGCCCAACCGCGGCGCCCGGATCAGGGTGGTCTCGGTCGAGGAGGCCGTCCAGATCACC
GAGTGCCGCTCCGCGCTGGAGCGGCTGTGCGCGCGCAAGGCGGCCGAGCGCGTCACCCCG
GAGCAGCGCGCCGCGCTGGCCGAGGTCGGCGAGCAACTGCGCACGGCGGTCGCGGAAGGA
GCGCTGGAGGCGTACTCCACCCTCAACCGCAGGCTGCACGACCTGATCATCGAGTTCAGC
GGCCAGGCCGTCGCCCGGCGCCAGCTCGAACGGCTCAACACGCAGATGGTGCGCTTCCAG
TTCCGGCTGGCCATGCGGCCCGGCCGGCCTCAGGAGTCGCTGCCGCAACTGCTGGCCATC
GTGGACGCCGTCGGCTCCGGCGACCCCGACGCCGCCGACAAGGCCGCCGAGGCGCAGCTG
GCCGGCGTCATCGCGCAGTTGCGGGCGAGCGATCCCCCGGCCGCCCTGAGCGGATGGTAG

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09 		show BLAST table
InterPro
Database:interpro:38.0
IPR000524 Transcription regulator HTH, GntR (Domain)
[4-71] PS50949
PS50949   HTH_GNTR
[9-68] 9.5e-16 PF00392
PF00392   GntR
[10-68] 2.89999717862184e-15 SM00345
SM00345   HTH_GNTR
IPR011711 GntR, C-terminal (Domain)
[78-202] 1.39999892049878e-21 SM00895
SM00895   FCD
[78-201] 7.20000000000003e-27 PF07729
PF07729   FCD
IPR011991 Winged helix-turn-helix transcription repressor DNA-binding (Domain)
[8-69] 3.3e-17 G3DSA:1.10.10.10
G3DSA:1.10.10.10   Wing_hlx_DNA_bd
SignalP No significant hit
TMHMM No significant hit
Rever_00030 Rever_00030   Rever_00050 Rever_00050
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