FD891_00030 : CDS information
Location
Organism | Streptomyces graminofaciens |
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Strain | A-8890 |
Entry name | FD-891 |
Contig | AB469193 |
Start / Stop / Direction | 40,719 / 47,405 / + [in whole cluster] 40,719 / 47,405 / + [in contig] |
Location | 40719..47405 [in whole cluster] 40719..47405 [in contig] |
Type | CDS |
Length | 6,687 bp (2,228 aa) |
Annotation
Category | 1.1 PKS |
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Product | polyketide synthase |
Product (GenBank) | polyketide synthase |
Gene | |
Gene (GenBank) | gfsC |
EC number | |
Keyword | |
Note | |
Note (GenBank) | |
Reference |
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PKS/NRPS Module
8 | malonyl-CoA |
Sequence
>polyketide synthase [polyketide synthase] MTDEAKLLSYLKRVTADLDRTTRRLREAEEQRYEAIAIVGMACRYPGGVRSPEELWRLVA DEADAVSHFPQNRGWDLDTLFDPERAGGTSLTQEGGFLYDADQFDAGFFGIGPREATAMD PQQRLLLETSWEALERAGIDPATLRGSATGVFAGVMYHDYGARVVEVPEEVEGYLGNGNA GSIASGRVAFTFGFEGPAVTLDTACSSSLVALHLAAQALRQGECSLALAGGVTVMATPGV FTEFTRQGGLAADGRCKSFSTTADGTGWSEGAGMLLLERLSDAERNGHLVLAVVRGSAVN QDGASSGLTAPNGPAQQRVIRQALANARLSASEVDVVEAHGTGTKLGDPIEAQALLATYG QDRAEDRPLWLGSVKSNLGHTQAAAGVAGIIKSVMAMRHGVLPATLHVDEPTSEVDWSAG AVELLTKSRSWPETGRPRRAAVSGFGVSGTNAHVILEQAADLDVPDAAPVPEGVPVPWVV SARSADALRAQARRLRGHMAAEPGAAVVDVGHSLATARSCFEHRAVVIGRTTDDLLAGLE ALAEGRGDSRVRVGAGLAGGRTGFVFAGQGSQRLGMGGRLREMFPVFGEAWDEVVAELDG RLGRPLGEVVFAEEGSEQASLVDRTEFTQPALFAFEVALFRLLESWGVVPDVVAGHSIGE LAAAYVAGVLSLSDACALVVARGRLMQALPAGGAMVAVQVTEAEARRLVEGEPSGAVDIA AVNGPESVVIAGDEDVVLRVQEIVRGRGRKTKRLTVSHAFHSPRMEPMLDEFRRVAETVT YHEPRIAVVSAVSGEVAGAELRSAEYWTRHVREAVRFYDAVRCLRSEGVSTFVEVGPDGA LSALGQDCLVGEEARGTEFVSTVRAGRDEAESVVAAVGAAHVRGVPVDWAAYYAPYGPRR AGLPTYAFEHQRYWLDASVRTVGDLAGLGLGSAEHPLLGAAVALADGDGVLLTGRLSLAT HPWLADHRVQGAVLFPGTAFVELALRAGEQVGADCVEELTLEVPLVLPERGGVQVQVVVG AADEQGGRPVTVYSRPDEDVEDEPWARHAIGMLVPFAASAAVPAEDADFAVWPPQDAVAV DTDGMYDRLAEGGLEYGPVFQGLRSVWRRGSEVFAEVALDDTHRDGAEHDVSAVSAPETT APVWRLEATGGGTLDALALVAYEETDRPLRANEVRVEVHAAGLNFRDVLITLGMLETKDK LGWELSGVVLETGPDVTGLAPGDRVMGVALGSFAQQAVADHRMLAKIPDGWSYAEAASVP LVFLTAYYSLVDLADLRAGQSVLIHAAAGGVGMAAVQLARHLGAEVFGTASTGKWDALRA QGLDETHIASSRDLEFEPRVLEATDGRGVDVVLDALAGEFVDASLRTLTHGGRFIEMGKT DIRDAEEVAARYPGVHYRAFDLIEAGPERVGQMLAEVLRLFDDGALTVLPVTTWDLLSAP DAFRHLSQARHIGKVVLTVPRTIDPYDTELAVVTRSRSRWRTGRSSARLTANPNSAGEFG LHPALLDAALHAIGFGEFVSDGGAGVLPFSWSGVRLLASGADALRVRVSGVGVGANEVAL VVADGSGRPVASVDSLALRPVSADGIGAGRSGASRQSLFRVGWRQVAVPDQAGAGEWVAL DRGAGWAQGEGCEVLPDLAALGSAVSAGRSVPRLVVAHFAADREVPVTAGVRGVTAEGLE LIQSWLADERFADSRLVIMTRQAVAVDAGEGVFDLGAAALWGLVRTAQSEQPGRVVLVDV DDLDAVSRVVGIGDEPQLAVRDGRVFVPRLMRAEAIDGVPVWDPEGTLLITGASGALGGV VARHVVREWGVRHLVLASRRGAEAPGMTELVAELGELGASAAPVACDVADRDALAAVLAG IPAVHRLAGVVHAAGVLDDGVVGSLTPERLETVLAPKADAAWHLHELAAELDLSVFVLFS SAASVFGGAGQGNYAAANAFLDALAARRRADGLVATSLSWGLWDQAGGMTGQLGEADVAR MSRSGVLPISVGEALPLLDAGVTGGDAWLAPVRLDLAALRQQAIATGGVPALLRDLVRVP NRRKAETGGSGAGSRSSLTDKLAGLPQEERAQELLDFVCEHTAAVLGHSGAGMVDPGRNF RELGIDSLAAVELRNRIGGVLGIRLSATLVFDYPSPVLLAGHIGEQLALDEPAPRLPVVA ELERLEAAVSAARFDEDSRDDVAARLRKLLSHLDALAASPKREADDGELASASVEELFAL VDQELEDL
>polyketide synthase [polyketide synthase] ATGACCGACGAAGCAAAGCTCCTCAGCTACTTGAAGCGGGTCACCGCCGATCTGGACCGG ACGACTCGCCGTCTGCGCGAGGCCGAGGAGCAGCGGTACGAGGCGATCGCGATCGTGGGG ATGGCGTGCCGTTACCCGGGCGGAGTGCGTTCGCCGGAGGAGCTGTGGCGGCTGGTCGCC GACGAGGCCGACGCCGTCTCCCACTTCCCCCAGAACCGAGGGTGGGACCTGGACACGCTG TTCGATCCGGAGCGTGCCGGGGGCACCAGCCTCACCCAGGAGGGCGGGTTCCTCTACGAC GCGGACCAGTTCGACGCCGGCTTCTTCGGCATCGGGCCGCGTGAGGCCACGGCGATGGAT CCGCAGCAGCGGCTGCTGCTGGAGACCTCCTGGGAGGCGCTGGAACGGGCCGGTATCGAC CCGGCGACCCTGCGCGGCAGCGCCACCGGCGTCTTCGCGGGGGTCATGTACCACGACTAC GGCGCCCGGGTCGTCGAGGTTCCGGAGGAGGTCGAGGGCTACCTGGGCAACGGCAACGCG GGCAGCATCGCCTCCGGACGTGTGGCCTTCACGTTCGGCTTCGAGGGACCGGCGGTCACG CTCGACACCGCCTGCTCCTCCTCCCTGGTCGCGCTGCACCTGGCCGCCCAGGCGCTACGG CAGGGCGAGTGCTCCCTGGCTCTCGCCGGTGGCGTCACCGTGATGGCGACGCCGGGCGTG TTCACCGAGTTCACCCGGCAGGGCGGGCTGGCCGCCGACGGCCGCTGCAAGTCCTTCTCC ACCACGGCCGACGGCACCGGCTGGAGCGAGGGCGCGGGCATGCTCCTGCTGGAGCGCCTG TCGGACGCCGAGCGCAACGGCCACCTGGTGCTCGCGGTCGTACGTGGCAGTGCGGTCAAC CAGGACGGCGCGTCCAGCGGGCTGACGGCGCCGAACGGTCCCGCCCAGCAGCGGGTGATC CGGCAGGCGTTGGCGAACGCCCGTCTGTCCGCGTCCGAGGTGGATGTGGTGGAGGCGCAC GGTACGGGGACGAAGCTGGGTGACCCGATCGAGGCGCAGGCACTCCTGGCCACCTACGGC CAGGACCGGGCGGAGGACCGGCCGTTGTGGCTGGGCTCGGTGAAGTCGAACCTCGGGCAT ACGCAGGCCGCTGCGGGTGTCGCCGGGATCATCAAGTCGGTGATGGCGATGCGGCATGGT GTGCTGCCGGCCACGCTGCATGTGGATGAGCCGACCTCGGAGGTCGACTGGTCGGCGGGT GCGGTGGAACTGCTCACCAAGAGCCGCTCCTGGCCCGAGACCGGGCGTCCGCGCCGGGCC GCGGTCTCCGGCTTCGGCGTCAGCGGTACCAACGCACACGTCATCCTCGAACAGGCCGCC GACTTGGACGTGCCCGACGCCGCACCCGTGCCCGAGGGGGTTCCGGTGCCATGGGTGGTG TCCGCGCGCAGCGCTGATGCTCTGCGCGCCCAGGCCCGACGGTTGCGGGGGCACATGGCG GCCGAGCCCGGTGCGGCTGTCGTCGACGTGGGCCACTCGCTGGCCACCGCTCGTTCGTGC TTCGAGCACCGCGCGGTGGTGATCGGGCGGACAACGGACGACCTCTTGGCAGGGCTGGAG GCGCTGGCTGAGGGGCGTGGGGATTCCCGGGTGCGGGTCGGTGCTGGGTTGGCCGGGGGG CGTACGGGGTTCGTGTTCGCGGGGCAGGGGTCGCAGCGGTTGGGTATGGGTGGCCGGCTT CGGGAGATGTTCCCTGTCTTCGGTGAGGCGTGGGACGAGGTGGTCGCGGAGTTGGATGGG CGGCTGGGGCGGCCGTTGGGTGAGGTGGTGTTCGCGGAGGAGGGTTCGGAACAGGCCTCG CTTGTGGATCGTACGGAGTTCACGCAGCCGGCGTTGTTCGCGTTCGAGGTGGCGTTGTTC CGGCTGTTGGAGTCGTGGGGTGTGGTGCCCGATGTGGTGGCCGGGCATTCGATCGGTGAG CTTGCGGCGGCGTATGTGGCGGGGGTGCTGTCGCTGTCGGATGCGTGTGCGTTGGTGGTG GCGCGGGGCCGGTTGATGCAGGCGTTGCCGGCCGGTGGGGCGATGGTGGCGGTGCAGGTC ACGGAGGCCGAGGCACGGCGACTTGTCGAGGGTGAGCCTTCGGGTGCGGTGGATATCGCG GCGGTGAATGGGCCGGAGTCCGTGGTGATCGCCGGTGACGAGGACGTGGTGCTGCGTGTC CAGGAGATCGTGCGCGGGCGGGGCCGTAAGACGAAGCGTTTGACGGTGTCGCATGCGTTC CACTCGCCGCGCATGGAGCCGATGCTCGACGAGTTCCGCCGGGTGGCCGAGACGGTGACT TATCACGAGCCTCGCATTGCGGTGGTCTCCGCGGTGTCGGGTGAGGTGGCGGGTGCGGAG TTGCGGTCGGCGGAGTACTGGACGCGGCATGTGCGTGAGGCGGTGCGCTTCTACGACGCG GTGCGGTGTCTGCGGAGCGAAGGCGTGAGCACGTTCGTGGAGGTCGGTCCGGACGGGGCG TTGTCCGCGCTGGGGCAGGACTGCCTGGTCGGGGAGGAGGCGCGGGGCACGGAGTTTGTG TCCACGGTGCGGGCCGGGCGCGATGAGGCCGAGAGCGTGGTGGCGGCCGTGGGCGCTGCG CATGTGCGCGGTGTGCCGGTGGACTGGGCCGCGTACTACGCCCCGTACGGCCCGCGTCGG GCGGGCCTGCCGACGTACGCCTTCGAACATCAGCGGTACTGGTTGGATGCGTCCGTCCGC ACGGTGGGTGATCTCGCGGGGCTGGGCCTGGGTTCGGCGGAGCATCCGTTGCTCGGCGCG GCGGTGGCCCTGGCGGATGGCGACGGGGTGTTGCTGACCGGGCGGTTGTCGCTGGCGACG CATCCGTGGCTGGCGGATCACCGGGTGCAGGGTGCTGTGCTGTTCCCCGGGACGGCGTTC GTGGAGCTTGCGTTGCGGGCCGGGGAGCAGGTGGGCGCGGACTGTGTCGAGGAGCTGACG CTGGAGGTGCCGTTGGTGCTTCCGGAGCGTGGTGGTGTGCAGGTCCAGGTGGTCGTCGGC GCTGCGGACGAGCAAGGTGGCCGTCCGGTGACGGTGTACTCCCGGCCTGATGAGGACGTG GAGGACGAGCCGTGGGCTCGGCACGCGATCGGCATGCTGGTCCCCTTCGCCGCCTCTGCC GCCGTACCGGCGGAGGACGCCGACTTCGCCGTGTGGCCGCCCCAGGATGCGGTGGCTGTG GACACGGACGGGATGTACGACCGGCTGGCGGAGGGCGGTCTCGAGTACGGGCCGGTGTTC CAGGGCTTGCGGTCGGTGTGGCGGCGCGGCTCGGAGGTGTTCGCCGAGGTCGCGCTGGAC GACACCCACCGCGACGGCGCCGAACACGATGTGTCAGCGGTGTCGGCCCCGGAGACGACC GCTCCGGTGTGGCGGTTGGAGGCCACGGGCGGCGGCACTCTGGACGCGCTGGCGCTGGTG GCGTACGAGGAGACGGACCGCCCCCTTCGGGCGAACGAGGTCCGGGTCGAGGTCCACGCG GCGGGCCTGAACTTCCGCGACGTACTGATCACTCTGGGCATGCTCGAAACCAAGGACAAG CTCGGCTGGGAACTGTCCGGCGTCGTCCTGGAGACCGGCCCGGACGTCACCGGTCTCGCG CCCGGCGACCGGGTGATGGGGGTGGCGCTCGGCTCGTTCGCTCAGCAGGCCGTGGCCGAC CACCGCATGCTGGCGAAGATCCCGGACGGATGGTCGTACGCGGAGGCGGCCTCGGTTCCG CTGGTGTTCCTGACCGCCTACTACAGCCTGGTGGATCTGGCCGACCTGCGAGCGGGCCAG TCGGTGCTGATCCATGCCGCCGCCGGCGGTGTGGGCATGGCGGCCGTGCAGTTGGCGCGG CATCTGGGCGCCGAAGTGTTCGGTACGGCGAGCACCGGCAAGTGGGACGCGCTACGGGCG CAGGGCCTGGACGAGACCCACATCGCCTCCTCGCGGGACCTGGAGTTCGAGCCACGCGTG CTGGAGGCGACGGACGGCCGGGGAGTGGACGTCGTTCTCGACGCGCTGGCCGGTGAGTTC GTGGACGCGTCACTGCGGACGCTCACCCACGGTGGCCGGTTCATCGAGATGGGCAAGACC GACATCCGTGACGCGGAAGAGGTCGCCGCCCGGTACCCCGGCGTCCACTACCGCGCCTTC GACCTGATCGAGGCCGGGCCGGAACGCGTCGGACAGATGCTCGCGGAGGTGCTGCGGCTG TTCGACGACGGCGCGCTGACGGTACTGCCGGTCACCACCTGGGATCTCCTGAGCGCACCG GACGCCTTCCGCCACCTGAGCCAGGCGCGACACATAGGCAAGGTCGTTCTCACGGTGCCA CGCACCATCGACCCGTACGACACGGAACTGGCCGTCGTCACGAGGAGCAGGAGCAGGTGG AGGACCGGACGGTCGTCTGCCCGCCTCACGGCGAACCCGAACAGCGCGGGGGAGTTCGGT CTTCATCCGGCGCTGCTGGATGCGGCGTTGCACGCGATCGGGTTCGGGGAGTTCGTGAGT GACGGTGGGGCGGGGGTACTGCCGTTCTCGTGGAGCGGGGTCCGTCTTCTCGCGTCGGGT GCGGATGCGTTGCGGGTGCGGGTGTCCGGGGTCGGCGTCGGGGCGAACGAGGTTGCGCTG GTGGTCGCGGACGGCTCCGGGCGGCCGGTGGCATCGGTGGACTCGTTGGCGTTGCGGCCT GTGTCTGCGGACGGGATCGGTGCGGGGCGGTCGGGTGCGTCGCGGCAGTCGTTGTTCCGG GTGGGGTGGCGGCAGGTGGCCGTGCCGGATCAGGCGGGTGCGGGGGAGTGGGTGGCCCTC GACCGGGGTGCTGGCTGGGCGCAGGGGGAGGGGTGCGAGGTCCTGCCCGACCTGGCCGCG CTCGGCTCGGCGGTCTCCGCCGGCCGATCGGTGCCGCGTCTGGTGGTGGCGCATTTCGCC GCCGATCGTGAGGTGCCCGTCACGGCCGGGGTGCGTGGAGTGACGGCTGAGGGACTGGAG TTGATCCAGTCCTGGCTGGCGGACGAGAGGTTCGCCGACTCGCGGCTCGTGATTATGACC CGCCAGGCCGTCGCGGTGGATGCCGGTGAGGGTGTCTTTGATCTGGGTGCGGCGGCGTTG TGGGGTCTGGTGCGTACGGCGCAGTCGGAGCAGCCGGGCCGGGTCGTGCTGGTGGATGTG GATGACCTGGATGCGGTGTCCCGGGTGGTCGGGATCGGTGATGAGCCGCAGCTCGCGGTG CGGGATGGCCGGGTGTTCGTGCCGCGTCTGATGCGGGCCGAAGCCATTGATGGGGTGCCG GTGTGGGATCCCGAGGGCACGTTGTTGATCACGGGTGCGTCGGGTGCGTTGGGTGGTGTG GTCGCCCGGCATGTGGTCCGTGAGTGGGGCGTACGGCACCTGGTTCTCGCGAGCCGTCGT GGCGCGGAGGCTCCCGGTATGACGGAACTGGTCGCGGAACTGGGTGAGTTGGGTGCTTCG GCTGCTCCGGTGGCCTGTGACGTGGCGGACCGGGACGCGCTGGCTGCCGTACTGGCTGGT ATTCCTGCCGTGCACCGGCTGGCGGGTGTGGTCCATGCGGCTGGTGTCCTGGACGACGGC GTGGTGGGTTCGCTCACTCCTGAGCGGTTGGAGACGGTCCTGGCGCCGAAGGCGGACGCG GCCTGGCATCTGCACGAGCTGGCCGCGGAGCTGGACCTGTCGGTGTTCGTGCTGTTCTCT TCCGCGGCGAGTGTCTTCGGTGGTGCGGGTCAGGGCAATTACGCCGCGGCGAATGCCTTC CTCGATGCGCTCGCTGCGAGGCGTCGGGCCGATGGCCTGGTGGCGACCTCGCTCTCGTGG GGCCTGTGGGACCAGGCCGGCGGTATGACGGGGCAGTTGGGTGAGGCGGACGTGGCCCGG ATGAGTCGTTCGGGCGTGCTGCCGATCTCCGTCGGCGAGGCACTGCCGCTGCTTGACGCC GGTGTGACCGGCGGCGATGCCTGGCTGGCGCCGGTCCGGCTGGACCTCGCCGCGCTGCGG CAGCAGGCCATCGCCACCGGGGGAGTGCCCGCACTGCTCCGCGATCTGGTCCGCGTACCG AACCGCCGCAAGGCCGAAACCGGCGGCAGCGGTGCAGGTTCGAGGTCGTCCCTCACCGAC AAGCTCGCCGGCCTGCCCCAGGAAGAGCGGGCGCAGGAACTGCTGGACTTCGTCTGCGAG CACACCGCGGCCGTACTGGGCCACTCCGGCGCCGGCATGGTCGACCCCGGCCGGAACTTC CGTGAACTGGGCATCGACTCGCTGGCCGCGGTGGAGCTGCGCAATCGCATCGGCGGCGTC CTCGGCATCCGGCTCTCGGCCACGCTGGTCTTCGACTACCCCTCGCCGGTGCTGCTCGCC GGGCACATCGGGGAGCAACTCGCGCTGGACGAACCCGCACCCCGGCTGCCGGTGGTGGCG GAGTTGGAGCGGCTGGAGGCCGCGGTGTCCGCCGCGCGCTTCGACGAGGACTCCCGGGAC GACGTGGCCGCCCGGCTGCGGAAACTCCTGTCGCACCTCGACGCCCTGGCCGCCTCCCCG AAGAGGGAGGCCGACGACGGCGAACTCGCCTCGGCGAGCGTCGAGGAACTCTTCGCACTG GTCGACCAGGAACTCGAAGACCTCTGA
Feature
BLASTP Database:UniProtKB:2011_09 |
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InterPro Database:interpro:38.0 |
IPR001227 Acyl transferase domain (Domain)
IPR002198 Short-chain dehydrogenase/reductase SDR (Family)
IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site (Conserved_site)
IPR006162 Phosphopantetheine attachment site (PTM)
IPR009081 Acyl carrier protein-like (Domain)
IPR011032 GroES-like (Domain)
IPR013149 Alcohol dehydrogenase, C-terminal (Domain)
IPR013154 Alcohol dehydrogenase GroES-like (Domain)
IPR014030 Beta-ketoacyl synthase, N-terminal (Domain)
IPR014031 Beta-ketoacyl synthase, C-terminal (Domain)
IPR014043 Acyl transferase (Domain)
IPR015083 Polyketide synthase, docking (Domain)
IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase (Domain)
IPR016036 Malonyl-CoA ACP transacylase, ACP-binding (Domain)
IPR016038 Thiolase-like, subgroup (Domain)
IPR016039 Thiolase-like (Domain)
IPR016040 NAD(P)-binding domain (Domain)
IPR018201 Beta-ketoacyl synthase, active site (Active_site)
IPR020801 Polyketide synthase, acyl transferase domain (Domain)
IPR020806 Polyketide synthase, phosphopantetheine-binding domain (Domain)
IPR020807 Polyketide synthase, dehydratase domain (Domain)
IPR020841 Polyketide synthase, beta-ketoacyl synthase domain (Domain)
IPR020842 Polyketide synthase/Fatty acid synthase, KR (Domain)
IPR020843 Polyketide synthase, enoylreductase (Domain)
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SignalP | |
TMHMM | No significant hit |