Madu_00260
Madu_00270 : CDS information
Location
| Organism | Actinomadura madurae |
|---|---|
| Strain | ATCC 39144 |
| Entry name | Maduropeptin |
| Contig | AY271660 |
| Start / Stop / Direction | 43,750 / 42,173 / - [in whole cluster] 43,750 / 42,173 / - [in contig] |
| Location | complement(42173..43750) [in whole cluster] complement(42173..43750) [in contig] |
| Type | CDS |
| Length | 1,578 bp (525 aa) |
Annotation
| Category | 4.3 transport |
|---|---|
| Product | putative drug resistance transporter |
| Product (GenBank) | transmembrane efflux protein |
| Gene | |
| Gene (GenBank) | mdpR3 |
| EC number | |
| Keyword | |
| Note | |
| Note (GenBank) | |
| Reference |
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| Related Reference |
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Sequence
>putative drug resistance transporter [transmembrane efflux protein] MTNPAQPPKAGRREWIALAVLCLPTMLAAVDINIMFLALPHIAEDLGSGGTAQLWMTDIY GFMIAGFLITMGSLGDRIGRRKLLMAGSAVFLVASLFAAFATSTEMLIISRAVLGVAGAT IAPSVLGLLRQMFQDPKQMGAAMGLWGTSIMLGSVLGPVVGGLLLGAFWWGSIFIMAVPI TGLLLLTGFFLLPESNNPNAPKLDLISVGMTLAGILPLIWGLKEAAREGWSAGSIAAVAI GAVFLVAFVQRQRMVENPLMDLSLFRVRTLSIALLLALSIALVMGGLGLMATQFMQMILD LSAFRVGAWMLLPAIALFIIGNMGTALARKIRPGIVLAGGALVAAVGMVVVAQVTPSSSL ALLLIGMAIVFGGGGMIGIMSPFLVMSSAPPEKGGAAGSYSSTVGEFGTALGVAVMGLIG TAVYRGQLTVPSGVPEEAAEVAQESISGAVFTSEAISDAQGTELLASAESAFTDSFHTVA WIAVVLYVGVAALAAFGLKHVPATGDQPADPMGAQGVEQVPDGVS
>putative drug resistance transporter [transmembrane efflux protein] ATGACGAACCCCGCCCAACCTCCCAAGGCAGGGAGGCGGGAATGGATCGCGCTGGCAGTG CTCTGCCTGCCCACCATGTTGGCGGCCGTGGACATCAACATCATGTTCCTGGCCCTGCCG CACATCGCCGAGGACCTGGGGTCCGGCGGAACGGCCCAGCTGTGGATGACCGACATCTAC GGTTTCATGATCGCCGGCTTCCTCATCACCATGGGGTCCCTCGGTGACCGCATCGGGCGA CGCAAGCTGCTGATGGCCGGGTCCGCGGTGTTCCTCGTGGCGTCGCTGTTCGCGGCCTTC GCCACCTCGACCGAGATGCTGATCATCTCGCGCGCGGTGCTGGGCGTCGCCGGCGCCACG ATCGCGCCGTCGGTACTGGGCCTGCTGCGGCAGATGTTCCAGGATCCGAAGCAGATGGGC GCCGCCATGGGGCTGTGGGGCACCTCGATCATGCTCGGCTCCGTCCTCGGCCCGGTCGTC GGCGGGCTGCTGCTCGGCGCCTTCTGGTGGGGATCGATCTTCATCATGGCGGTGCCGATC ACGGGCCTGCTGCTGCTGACCGGCTTCTTCCTCCTGCCGGAGTCGAACAACCCGAACGCC CCGAAGCTCGACCTGATCAGCGTCGGCATGACCCTGGCGGGCATCCTGCCGCTGATCTGG GGGCTCAAGGAGGCGGCCCGGGAGGGTTGGAGCGCCGGTTCGATCGCCGCGGTCGCCATC GGCGCGGTGTTCCTGGTGGCCTTCGTCCAGCGCCAGCGCATGGTCGAGAACCCGCTGATG GACCTGAGCCTGTTCCGGGTGCGCACCCTGTCGATCGCGCTCCTGCTGGCGCTGTCGATC GCGCTCGTCATGGGCGGCCTGGGCCTGATGGCGACGCAGTTCATGCAGATGATCCTCGAC CTCAGCGCGTTCCGGGTGGGGGCGTGGATGCTGCTGCCGGCGATCGCGCTGTTCATCATC GGCAACATGGGCACGGCCCTGGCCCGCAAGATCCGTCCGGGGATCGTGCTGGCCGGGGGC GCGCTGGTCGCCGCCGTGGGCATGGTCGTCGTCGCCCAGGTGACCCCGTCGTCGTCGCTG GCGCTGCTGCTGATCGGCATGGCGATCGTGTTCGGCGGCGGCGGGATGATCGGCATCATG AGCCCGTTCCTGGTGATGTCGTCGGCGCCCCCCGAGAAGGGCGGCGCCGCGGGGTCGTAC TCGTCGACCGTCGGCGAGTTCGGTACCGCGCTGGGCGTCGCGGTCATGGGCCTGATCGGC ACCGCCGTGTACCGCGGCCAGCTCACCGTCCCGTCCGGTGTTCCGGAGGAGGCGGCCGAG GTGGCGCAGGAGAGCATCAGCGGCGCGGTGTTCACGAGCGAGGCGATCTCCGACGCGCAG GGCACCGAGCTGCTGGCGTCGGCCGAGAGCGCCTTCACCGACAGCTTCCACACCGTGGCG TGGATCGCGGTGGTGCTGTACGTCGGGGTGGCCGCCCTGGCGGCCTTCGGCCTCAAGCAC GTCCCCGCCACCGGCGACCAGCCGGCGGACCCCATGGGGGCGCAGGGCGTCGAGCAGGTG CCCGACGGAGTGAGCTGA
Feature
| BLASTP Database:UniProtKB:2011_09 |
|
|---|---|
| InterPro Database:interpro:38.0 |
IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG (Family)
IPR011701 Major facilitator superfamily (Family)
IPR016196 Major facilitator superfamily domain, general substrate transporter (Domain)
IPR020846 Major facilitator superfamily domain (Domain)
|
| SignalP | No significant hit |
| TMHMM |  ![[17-39] Transmembrane (i-o)](../../img/C.gif "[17-39] Transmembrane (i-o)"){kind=small} ![[54-76] Transmembrane (o-i)](../../img/G.gif "[54-76] Transmembrane (o-i)"){kind=small} |
![[27-43] 1.6999992228405e-06 PR01035](../../img/F.gif "[27-43] 1.6999992228405e-06 PR01035"){kind=small}
![[25-412] 4.70000000000003e-44 PF07690](../../img/H.gif "[25-412] 4.70000000000003e-44 PF07690"){kind=small}
![[1-503] 9.80000272130214e-66 SSF103473](../../img/B.gif "[1-503] 9.80000272130214e-66 SSF103473"){kind=small}
![[17-460] PS50850](../../img/M.gif "[17-460] PS50850"){kind=small}
