Calm_00440 : CDS information

Location

Organism	Micromonospora echinospora
Strain	NRRL 15839
Entry name	Calicheamicin
Contig	AF497482
Start / Stop / Direction	53,061 / 53,453 / + [in whole cluster] 53,061 / 53,453 / + [in contig]
Location	53061..53453 [in whole cluster] 53061..53453 [in contig]
Type	CDS
Length	393 bp (130 aa)

Annotation

Category	4.1 transcriptional regulator
Product	putative ArsR family transcriptional regulator
Product (GenBank)	CalR8
Gene
Gene (GenBank)	calR8
EC number
Keyword
Note
Note (GenBank)
Reference	ACC Q8KNF3 PmId [12183629] The calicheamicin gene cluster and its iterative type I enediyne PKS. (Science. , 2002) comment calicheamicin生合成遺伝子クラスターの報告このORFは、Fig2の生合成clusterにて、putative regulatory elements(R1 to R9)と示されているのみ。本文中では特にふれていない。
Family/Domain	FD IPR001845 comment [IPR001845] HTH ArsR-type DNA-binding domain (Domain)

Sequence

>putative ArsR family transcriptional regulator [CalR8]
MHAFDILGDPVRRRIIELLADGELSAGEVGAVVQREFGISQPGVSQHLRVLRENGFATVR
PQGTRRLYAVDPAPLQELDRWLERYRRFWNQRLDALGTEIARGRARQGEGRAGGSEGRPP
RRRAAADGQD

>putative ArsR family transcriptional regulator [CalR8]
GTGCACGCGTTCGACATCCTGGGCGACCCCGTCCGCCGGCGCATCATCGAGCTGCTGGCG
GACGGCGAGCTGTCGGCCGGCGAGGTCGGTGCGGTCGTGCAGCGCGAGTTCGGCATCTCC
CAGCCCGGCGTCTCCCAGCACCTGCGGGTGCTGCGCGAGAACGGCTTCGCCACCGTCCGC
CCGCAGGGCACGCGGCGGCTCTACGCGGTCGACCCCGCCCCGCTGCAGGAGCTCGACCGG
TGGCTGGAGCGCTACCGGCGATTCTGGAACCAGCGCCTCGACGCCCTGGGCACGGAGATC
GCGCGCGGTCGCGCCCGCCAGGGCGAGGGCCGCGCCGGCGGGTCCGAGGGGCGACCACCT
CGCCGCCGCGCGGCCGCCGACGGCCAGGACTGA

Feature

BLASTP Database:UniProtKB:2011_09	show BLAST table
InterPro Database:interpro:38.0	IPR001845 HTH ArsR-type DNA-binding domain (Domain) SM00418 HTH_ARSR PS50987 HTH_ARSR_2 PR00778 HTHARSR IPR011991 Winged helix-turn-helix transcription repressor DNA-binding (Domain) G3DSA:1.10.10.10 Wing_hlx_DNA_bd
SignalP	No significant hit
TMHMM	No significant hit

Calm_00430 Calm_00450