Calm_00510 : CDS information

Location

Organism	Micromonospora echinospora
Strain	NRRL 15839
Entry name	Calicheamicin
Contig	AF497482
Start / Stop / Direction	60,914 / 59,208 / - [in whole cluster] 60,914 / 59,208 / - [in contig]
Location	complement(59208..60914) [in whole cluster] complement(59208..60914) [in contig]
Type	CDS
Length	1,707 bp (568 aa)

Annotation

Category	4.3 transport
Product	putative transporter
Product (GenBank)	CalT6
Gene
Gene (GenBank)	calT6
EC number
Keyword
Note
Note (GenBank)
Reference	ACC Q8KNE6 PmId [12183629] The calicheamicin gene cluster and its iterative type I enediyne PKS. (Science. , 2002) comment calicheamicin生合成遺伝子クラスターの報告このORFは、Fig2の生合成clusterにて、membrane transport(T1 to T7)と示されているのみ。本文中では特にふれていない。
Related Reference	ACC P26906 PmId [1766370] A Bacillus subtilis dipeptide transport system expressed early during sporulation. (Mol Microbiol. , 1991) comment Bacillus subtilis Dipeptide-binding protein dppE_dppE 24%id, 4e-27 Bacillus subtilisで、dciA operonがdipeptide transport systemをコードしていることを示唆。dppEはdciAEのSynonym。
Family/Domain	FD IPR000914 comment [IPR000914] Bacterial extracellular solute-binding protein, family 5 (Domain)

Sequence

>putative transporter [CalT6]
MPDHDQQPRHGGTLRYYGPGGLDHLDPAAAYYAFSHQVIRLFARQLFSYPTTEDAAALVP
VPDVAAELPTVDNGGLSEDGRTYTIRLRDGVRWDTAPPRPVTAGDFVRGFKRMANPVAGA
GAIAYYTSTIAGMAEFAEGYRARFAGRTPTAAELADYQNGHEISGLWAKDDRTLVIELLR
PANDMLNLLAMPFASAAPREFDDLVPDGPDFARLVRSNGPYRITGYARGSHLTMDHNPAW
RADADPIRRRYVDRIEVRMARVSDERVRAEIESGAADLSWGAAVGRPRRRTAADRNLGWA
LNPYLAFNLHSPHERGALRDRTVRLAIAYAVDKARLVRFFDDMNIGTVTRPAHTAIPPGN
FGHREYDPYPTPGDRGDRARCRELLAEAGYPDGLRLTMIYRIDAVHGQVAKAIAEDLGAG
GVDVRLVEIDQTDEYYRILQDPARAAAGEWDITPAAWMPDWFGNNGRSYVQPMFQSNTGV
GTANYGGYHNPLVDELIDRALSARTEAEAEELWHRVDRQVLQDVAIVPILACEPTIEHLT
SSRVRGAIPLPHVDRWYDAANLWLDPPD

>putative transporter [CalT6]
GTGCCGGACCACGACCAGCAGCCTCGCCACGGCGGCACGCTGCGCTACTACGGGCCCGGT
GGCCTCGACCACCTGGACCCCGCCGCCGCGTACTACGCCTTCTCCCACCAGGTCATCCGG
CTCTTCGCCCGGCAGCTGTTCAGCTACCCGACCACGGAGGACGCCGCCGCGCTGGTGCCG
GTGCCCGACGTGGCCGCCGAGTTGCCCACGGTGGACAATGGCGGGCTCAGCGAGGACGGC
CGCACGTACACGATCCGCCTGCGCGACGGGGTCCGGTGGGACACCGCCCCGCCGCGGCCG
GTGACCGCGGGGGACTTCGTGCGCGGCTTCAAGCGGATGGCCAACCCGGTCGCCGGGGCC
GGCGCCATCGCCTACTACACGAGCACCATCGCCGGCATGGCGGAGTTCGCCGAGGGCTAC
CGCGCGCGCTTCGCCGGGCGTACGCCCACCGCCGCCGAGCTGGCCGACTACCAGAACGGC
CACGAGATCAGCGGGCTGTGGGCCAAGGACGACCGGACCCTGGTGATCGAGCTGCTGCGC
CCCGCCAACGACATGCTCAACCTGCTGGCGATGCCGTTCGCCTCCGCCGCGCCCCGGGAG
TTCGACGACCTCGTCCCGGACGGTCCGGACTTCGCGCGGCTGGTCCGCTCCAACGGGCCG
TACCGGATCACCGGCTACGCCCGGGGCAGCCACCTGACCATGGACCACAACCCCGCCTGG
CGGGCCGACGCAGACCCGATCCGCCGCCGCTACGTGGACCGTATCGAGGTGCGGATGGCG
AGGGTGAGCGACGAGCGGGTCCGCGCCGAGATCGAGAGCGGGGCGGCCGACCTGTCGTGG
GGCGCCGCCGTGGGCAGGCCCCGCCGGCGTACGGCGGCCGACCGGAACCTCGGCTGGGCG
CTGAACCCCTACCTGGCGTTCAACCTGCACAGCCCGCACGAGCGGGGGGCGCTGCGCGAC
CGGACCGTCCGGCTGGCGATCGCGTACGCCGTCGACAAGGCGCGGCTCGTCCGGTTCTTC
GACGACATGAACATCGGCACGGTGACCCGCCCCGCGCACACGGCCATCCCGCCGGGCAAC
TTCGGCCACCGCGAGTACGACCCGTACCCGACGCCGGGGGACCGGGGCGACCGGGCGCGC
TGCCGGGAGCTGCTCGCCGAGGCCGGGTACCCCGACGGGCTGCGGCTCACCATGATCTAC
CGGATCGACGCGGTGCACGGCCAGGTGGCCAAGGCGATCGCCGAGGACCTGGGCGCGGGC
GGCGTCGACGTCCGGCTGGTCGAGATCGACCAGACCGACGAGTACTACCGCATCCTCCAG
GACCCGGCCCGCGCGGCGGCGGGGGAGTGGGACATCACGCCGGCCGCCTGGATGCCGGAC
TGGTTCGGCAACAACGGGCGGTCGTACGTCCAGCCGATGTTCCAGTCCAACACCGGCGTC
GGCACGGCCAACTACGGCGGCTACCACAACCCGCTCGTCGACGAGCTGATCGACCGCGCG
TTGTCCGCCCGGACGGAGGCCGAGGCGGAGGAGCTGTGGCACCGGGTCGACCGGCAGGTG
CTGCAGGACGTGGCGATCGTGCCGATCCTGGCCTGCGAGCCGACCATCGAGCACCTGACC
AGTTCCCGGGTGCGGGGGGCGATCCCGCTGCCGCACGTGGACCGCTGGTACGACGCGGCG
AACCTCTGGCTGGACCCGCCCGACTGA

Feature

BLASTP Database:UniProtKB:2011_09	show BLAST table
InterPro Database:interpro:38.0	IPR000914 Bacterial extracellular solute-binding protein, family 5 (Domain) PF00496 SBP_bac_5
SignalP	No significant hit
TMHMM	No significant hit

Calm_00500 Calm_00520