Microbe : Enterococcus pallens

Microbe Description

NBRC No.	100697
Scientific name	Enterococcus pallens
Synonymous name	Not assigned
History	CCUG 45554 <- G.J. Tyrrell, PQ2
Other culture collection No.	ATCC BAA-351=CCM 7169=CCUG 45554=CIP 107663=DSM 15690=KCTC 13292
Other No.	PQ2
Reference	11923322 Enterococcus gilvus sp. nov. and Enterococcus pallens sp. nov. isolated from human clinical specimens. (J Clin Microbiol. 2002)

Functional Potential >>Details


Type	Pattern	Component Gene		CDS
Acid resistance (by GABA antiporter)(NFUNC_0071)
Require	A	GAD (NRULE_0231)	Glutamate decarboxylase	I588_01842
Require	A	GADC (NRULE_0234)	Glutamate/gamma-aminobutyrate antiporter	I588_01843
Alanine racemization(NFUNC_0063)
Require	A	ALR (NRULE_0228)	Alanine racemase	I588_02190 I588_03702
Anthranilate biosynthesis(NFUNC_0038)
Require	A	GLAT (NRULE_0142)	Glutamine amidotransferase	I588_00181
Require	A	TRPE (NRULE_0143)	Anthranilate synthase component I	I588_00180
Aromatic azo compounds degradation(NFUNC_0073)
Require	A	AZOR (NRULE_0236)	FMN-dependent NADH-azoreductase	I588_01391
Bacitracin resistance(NFUNC_0022)
Require	A	UPPP (NRULE_0097)	Undecaprenyl-diphosphatase	I588_04144
Chloramphenicol resistance(NFUNC_0025)
Require	A	CAT1 (NRULE_0107)	Chloramphenicol acetyltransferase	I588_01099 I588_03618
GABA biosynthesis(NFUNC_0066)
Require	A	GAD (NRULE_0231)	Glutamate decarboxylase	I588_01842
Macrolide antibiotic resistance(NFUNC_0045)
Require	B	RLMA (NRULE_0165)	23S rRNA (guanine-N(1))-methyltransferase	I588_03074
Malolactic fermentation(NFUNC_0070)
Require	A	MLE (NRULE_0233)	Malolactic enzyme	I588_05063
Metal-binding protein(NFUNC_0105)
Require	A	MOP (NRULE_0322)	Putative molybdenum-binding protein	I588_00708 I588_00760 I588_01743
Require	C	MODA (NRULE_0324)	Molybdate ABC transporter substrate-binding protein	I588_00699
Molybdate transport (ABC transporter)(NFUNC_0097)
Require	A	MODA (NRULE_0324)	Molybdate ABC transporter substrate-binding protein	I588_00699
Uptake of osmoprotectant(NFUNC_0061)
Require	A	OPUAC (NRULE_0213)	Osmoprotectant ABC transporter substrate-binding protein	I588_02180
		OPUAB (NRULE_0214)	Osmoprotectant ABC transporter permease protein	I588_00539 I588_05144 I588_02181 I588_02179
		OPUAA (NRULE_0215)	Osmoprotectant ABC transporter ATP-binding protein	I588_00542 I588_05143 I588_02178

Genomic Overview

BioProject ID	PRJNA191909
Locus_tag
INSDC entries	ASWD01000000
Sequence status	WGS
Current status
Contig number	13
Size(bp)	5,437,454
Gene	5,201
Finishing goal
Assembly method	allpaths v. R44557
Coverage
Technology	Illumina PacBio

Reference

Data Download

Genomic nucleotide sequence	Nucleotide sequence of the coding regions	Translation of the coding sequneces	List of genes / ORFs
FASTA gz	FASTA gz	FASTA gz	TSV uncompressed

1.6 MB	1.5 MB	976.8 KB	388.5 KB