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Microbe : Chromobacterium violaceum

Microbe Description

NBRC No. 12614
Scientific name Chromobacterium violaceum
Synonymous name Not assigned
History IFO 12614 <- Shizuoka Univ. <- ATCC 12472 <- P.H.A. Sneath, MK
Other culture collection No. ATCC 12472=CCUG 213=CIP 103350=DSM 30191=JCM 1249=LMG 1267=NCCB 80006=NCTC 9757
Other No. MK
Reference
Not assigned

Functional Potential >>Details

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TypePattern Component Gene CDS
Alanine racemization(NFUNC_0063)
RequireA
ALR
(NRULE_0228)
Alanine racemaseCV_1915 CV_3793
Aminoglycoside resistance (by aminoglycoside N-acetyltransferase)(NFUNC_0041)
RequireB
AAC6
(NRULE_0150)
Aminoglycoside N(6')-acetyltransferaseCV_0230
Anthranilate biosynthesis(NFUNC_0038)
RequireA
GLAT
(NRULE_0142)
Glutamine amidotransferaseCV_2175
TRPE
(NRULE_0143)
Anthranilate synthase component ICV_2179
Aromatic azo compounds degradation(NFUNC_0073)
RequireA
AZOR
(NRULE_0236)
FMN-dependent NADH-azoreductaseCV_2016
Arsenical resistance(NFUNC_0004)
RequireD
ARSB2
(NRULE_0016)
Arsenite resistance protein ArsBCV_2440
ARSC1
(NRULE_0017)
Arsenate reductaseCV_0770
E
ARSB2
(NRULE_0016)
Arsenite resistance protein ArsBCV_2440
ARSC2
(NRULE_0018)
Arsenate reductaseCV_2439
Bacitracin resistance(NFUNC_0022)
RequireA
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseCV_1929 CV_1327
Beta-lactam antibiotic resistance(NFUNC_0033)
RequireC
BLAC
(NRULE_0124)
Beta-lactamase class CCV_1310
Bioplastic synthesis(NFUNC_0001)
RequireA
PHAC1
(NRULE_0010)
Poly(3-hydroxyalkanoate) polymeraseCV_2789
Participant 
PHAB
(NRULE_0011)
Acetoacetyl-CoA reductaseCV_2364
 
PHAP1
(NRULE_0374)
PhasinCV_1366 CV_3374
Biotin biosynthesis(NFUNC_0051)
RequireA
BIOF
(NRULE_0182)
8-amino-7-oxononanoate synthaseCV_4380
BIOA
(NRULE_0183)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferaseCV_4210
BIOD
(NRULE_0184)
ATP-dependent dethiobiotin synthetase BioDCV_0598
BIOB
(NRULE_0185)
Biotin synthaseCV_4381
Cephalosporin resistance(NFUNC_0048)
RequireA
BLAC
(NRULE_0124)
Beta-lactamase class CCV_1310
Fosfomycin resistance(NFUNC_0023)
RequireA
FOSA
(NRULE_0098)
Glutathione transferase FosACV_0163
Metal-binding protein(NFUNC_0105)
RequireA
MOP
(NRULE_0322)
Putative molybdenum-binding proteinCV_3653
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinCV_0928 CV_0311 CV_3164 CV_3726
F
SOXR
(NRULE_0329)
Redox-sensitive transcriptional activator SoxRCV_2793
I
ISCR
(NRULE_0332)
Rrf2 family transcriptional regulator IscRCV_1095
Molybdate transport (ABC transporter)(NFUNC_0097)
RequireA
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinCV_0311 CV_3726 CV_3164 CV_0928
Participant 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinCV_3727
 
MODC
(NRULE_0326)
Molybdate ABC transporter ATP-binding proteinCV_1828
Riboflavin biosynthesis(NFUNC_0058)
RequireA
RIBB
(NRULE_0200)
3,4-dihydroxy-2-butanone 4-phosphate synthaseCV_2389 CV_4216
RIBA
(NRULE_0201)
GTP cyclohydrolase-2CV_2005 CV_2389
RIBD
(NRULE_0202)
Riboflavin biosynthesis protein RibDCV_1290
RIBH
(NRULE_0203)
6,7-dimethyl-8-ribityllumazine synthaseCV_2390
RIBE
(NRULE_0204)
Riboflavin synthaseCV_2387
Participant 
RIBF
(NRULE_0205)
Riboflavin biosynthesis protein RibFCV_3570
Uptake of osmoprotectant(NFUNC_0061)
RequireC
BCCT
(NRULE_0220)
BCCT family transporterCV_4302

Genomic Overview

BioProject IDPRJNA444
Locus_tagCV
INSDC entriesAE016825
Sequence statusComplete
Current status
Contig number1
Size(bp) 4,751,080
Gene 4,407
Finishing goal
Assembly method
Coverage
Technology
Reference
  • The complete genome sequence of Chromobacterium violaceum reveals remarkable and exploitable bacterial adaptability. (Proc Natl Acad Sci U S A. 2003) PMID: 14500782

Data Download

Genomic nucleotide sequence Nucleotide sequence of the coding regions Translation of the coding sequneces List of genes / ORFs
FASTA
gz
FASTA
gz
FASTA
gz
TSV
uncompressed
1.4 MB 1.2 MB 885.7 KB 344.6 KB