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微生物 : Clostridium acetobutylicum

微生物株情報

NBRC番号 13948
学名 Clostridium acetobutylicum
別名（シノニム） 該当データなし
由来 IFO 13948 <- ATCC 824 <- E.R. Weyer, strain L.S. McClung 2291
他保存機関番号 ATCC 824=BCRC 10639=CCRC 10639=CCUG 42182=DSM 792=IAM 19013=JCM 1419=KCTC 1790=LMG 5710=NCCB 29024=NCCB 84048=NCIMB 8052=NRRL B-527=VKM B-1787
他株番号 2291
参考文献
10937496
Comparative fermentation studies of industrial strains belonging to four species of solvent-producing clostridia. (J Mol Microbiol Biotechnol. 2000)
11466286
Genome sequence and comparative analysis of the solvent-producing bacterium Clostridium acetobutylicum. (J Bacteriol. 2001)

推定保有機能 >>詳細

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タイプパターン 構成遺伝子 該当CDS
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemaseCA_C0492 CA_C3331
Aminoglycoside resistance (by aminoglycoside N-acetyltransferase)(NFUNC_0041)
必須A
AAC3
(NRULE_0149)
Aminoglycoside N(3')-acetyltransferaseCA_C2197
Anthranilate biosynthesis(NFUNC_0038)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseCA_C3162
TRPE
(NRULE_0143)
Anthranilate synthase component ICA_C3163
Arginine degradation(NFUNC_0074)
必須A
ARGI
(NRULE_0239)
ArginaseCA_C1054
Aromatic azo compounds degradation(NFUNC_0073)
必須A
AZOR
(NRULE_0236)
FMN-dependent NADH-azoreductaseCA_C0604 CA_C3421
Bacitracin resistance(NFUNC_0022)
必須A
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseCA_C0501 CA_C0963
Chloramphenicol resistance(NFUNC_0025)
必須A
CAT1
(NRULE_0107)
Chloramphenicol acetyltransferaseCA_C0235 CA_P0060
Metal-binding protein(NFUNC_0105)
必須C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinCA_C0281 CA_C1705 CA_C3672
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinCA_C1705 CA_C3672 CA_C0281
Nitrogenase(NFUNC_0094)
必須A
NIFD
(NRULE_0347)
Nitrogenase molybdenum-iron protein alpha chainCA_C0256
NIFK
(NRULE_0348)
Nitrogenase molybdenum-iron protein beta chainCA_C0257
VNFH
(NRULE_0353)
Nitrogenase reductaseCA_C0253
(R)-pantothenate biosynthesis(NFUNC_0030)
必須A
PAND
(NRULE_0115)
Aspartate 1-decarboxylaseCA_C2916
PANB
(NRULE_0116)
3-methyl-2-oxobutanoate hydroxymethyltransferaseCA_C2914
PANE
(NRULE_0117)
2-dehydropantoate 2-reductaseCA_C1605 CA_C2937
PANC
(NRULE_0118)
Pantothenate synthetaseCA_C2915
Riboflavin biosynthesis(NFUNC_0058)
必須A
RIBB
(NRULE_0200)
3,4-dihydroxy-2-butanone 4-phosphate synthaseCA_C0592
RIBA
(NRULE_0201)
GTP cyclohydrolase-2CA_C0592
RIBD
(NRULE_0202)
Riboflavin biosynthesis protein RibDCA_C0590
RIBH
(NRULE_0203)
6,7-dimethyl-8-ribityllumazine synthaseCA_C0593
RIBE
(NRULE_0204)
Riboflavin synthaseCA_C0591
任意 
RIBF
(NRULE_0205)
Riboflavin biosynthesis protein RibFCA_C1806
Vitamin B6 biosynthesis (PdxS/PdxT pathway)(NFUNC_0059)
必須A
PDXS
(NRULE_0206)
Pyridoxal biosynthesis lyase PdxSCA_C0594
PDXT
(NRULE_0207)
Glutamine amidotransferase subunit PdxTCA_C0595

ゲノム配列情報

BioProject IDPRJNA77
ローカスタグCA
INSDC entriesAE001437
ステータスComplete
解析状況
コンティグ数2
サイズ(bp) 4,132,880
遺伝子数 3,848
フィニッシングゴール
アセンブル方法
冗長度
シーケンス方法
参考文献
  • Genome sequence and comparative analysis of the solvent-producing bacterium Clostridium acetobutylicum. (J Bacteriol. 2001) PMID: 11466286

データダウンロード

ゲノム塩基配列 CDS塩基配列 CDSアミノ酸変換配列 遺伝子/ORF リスト
FASTA
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