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微生物 : Hylemonella gracilis

微生物株情報

NBRC番号 14920
学名 Hylemonella gracilis
別名(シノニム) Aquaspirillum gracile
Spirillum gracile
由来 IFO 14920 <- Suzugamine Women's Coll. (Y. Terasaki) <- ATCC 19624 <- E. Canale-Parola
他保存機関番号 ATCC 19624=DSM 9158=LMG 8201=VKM B-1405
他株番号
参考文献
5296841
Morphological and physiological characteristics of Spirillum gracile sp. n. (Antonie Van Leeuwenhoek. 1966)

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タイプパターン 構成遺伝子 該当CDS
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemaseHGR_10792
Anthranilate biosynthesis(NFUNC_0038)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseHGR_05071
TRPE
(NRULE_0143)
Anthranilate synthase component IHGR_05076
Arginine degradation(NFUNC_0074)
必須A
ARGI
(NRULE_0239)
ArginaseHGR_16470
Aromatic azo compounds degradation(NFUNC_0073)
必須A
AZOR
(NRULE_0236)
FMN-dependent NADH-azoreductaseHGR_12697
Arsenical resistance(NFUNC_0004)
必須E
ARSB2
(NRULE_0016)
Arsenite resistance protein ArsBHGR_08024
ARSC2
(NRULE_0018)
Arsenate reductaseHGR_08029
Bacitracin resistance(NFUNC_0022)
必須A
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseHGR_02208
Beta-lactam antibiotic resistance(NFUNC_0033)
必須D
BLAD
(NRULE_0125)
Beta-lactamase class DHGR_08939
Bioplastic degradation(NFUNC_0015)
必須A
PHAZ1
(NRULE_0023)
Intracellular poly(3-hydroxyalkanoate) depolymeraseHGR_00809
Metal-binding protein(NFUNC_0105)
必須A
MOP
(NRULE_0322)
Putative molybdenum-binding proteinHGR_05896 HGR_13699 HGR_05881 HGR_04538
B
MODE
(NRULE_0323)
Putative molybdate-dependent transcriptional regulatorHGR_05896
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinHGR_04578 HGR_01567 HGR_05891 HGR_08974 HGR_13264 HGR_00530
E
CUER
(NRULE_0328)
Copper-responsive transcriptional regulator CueRHGR_14699
F
SOXR
(NRULE_0329)
Redox-sensitive transcriptional activator SoxRHGR_11755
I
ISCR
(NRULE_0332)
Rrf2 family transcriptional regulator IscRHGR_00779
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinHGR_08974 HGR_00530 HGR_01567 HGR_04578 HGR_05891 HGR_13264
任意 
MODE
(NRULE_0323)
Putative molybdate-dependent transcriptional regulatorHGR_05896
 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinHGR_05886
 
MODC
(NRULE_0326)
Molybdate ABC transporter ATP-binding proteinHGR_05881
Penicillin resistance(NFUNC_0047)
必須B
BLAD
(NRULE_0125)
Beta-lactamase class DHGR_08939
Phenol degradation(NFUNC_0028)
必須C
PHEA2
(NRULE_0084)
Aromatic ring hydroxylaseHGR_05469
任意 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentHGR_10967 HGR_15094
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinHGR_03722 HGR_01262 HGR_05226 HGR_01272 HGR_16500 HGR_16098 HGR_15934 HGR_05596 HGR_05571
 
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseHGR_15189 HGR_10962
Riboflavin biosynthesis(NFUNC_0058)
必須A
RIBB
(NRULE_0200)
3,4-dihydroxy-2-butanone 4-phosphate synthaseHGR_09503
RIBA
(NRULE_0201)
GTP cyclohydrolase-2HGR_09503 HGR_11381
RIBD
(NRULE_0202)
Riboflavin biosynthesis protein RibDHGR_09483
RIBH
(NRULE_0203)
6,7-dimethyl-8-ribityllumazine synthaseHGR_09508 HGR_14999
RIBE
(NRULE_0204)
Riboflavin synthaseHGR_09498
任意 
RIBF
(NRULE_0205)
Riboflavin biosynthesis protein RibFHGR_15739

ゲノム配列情報

BioProject IDPRJNA52551
ローカスタグ
INSDC entriesAEGR01000000
ステータスWGS
解析状況
コンティグ数115
サイズ(bp) 3,618,708
遺伝子数 3,342
フィニッシングゴール
アセンブル方法Velvet v. 0.7.55
冗長度588x
シーケンス方法
  • Illumina
参考文献
  • Structural diversity of bacterial flagellar motors. (EMBO J. 2011) PMID: 21673657

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ゲノム塩基配列 CDS塩基配列 CDSアミノ酸変換配列 遺伝子/ORF リスト
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