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Microbe : Acidobacterium capsulatum

Microbe Description

NBRC No. 15755
Scientific name Acidobacterium capsulatum
Synonymous name Not assigned
History IFO 15755 <- Mimasaka Women's Junior Coll. (N. Kishimoto, 161)
Other culture collection No. ATCC 51196=DSM 11244=JCM 7670=NCIMB 13165
Other No. 161
Reference
23835745
Acidiphilium aminolytica sp. nov.: An acidophilic chemoorganotrophic bacterium isolated from acidic mineral environment. (Curr Microbiol. 1993)

Functional Potential >>Details

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TypePattern Component Gene CDS
Alanine racemization(NFUNC_0063)
RequireA
ALR
(NRULE_0228)
Alanine racemaseACP_2160
Ampicillin resistance(NFUNC_0046)
RequireA
BLAA
(NRULE_0122)
Beta-lactamase class AACP_3424
Anthranilate biosynthesis(NFUNC_0038)
RequireA
GLAT
(NRULE_0142)
Glutamine amidotransferaseACP_2879
TRPE
(NRULE_0143)
Anthranilate synthase component IACP_2882
Arginine degradation(NFUNC_0074)
RequireA
ARGI
(NRULE_0239)
ArginaseACP_2205
Aromatic azo compounds degradation(NFUNC_0073)
RequireA
AZOR
(NRULE_0236)
FMN-dependent NADH-azoreductaseACP_3099
Arsenical resistance(NFUNC_0004)
RequireE
ARSB2
(NRULE_0016)
Arsenite resistance protein ArsBACP_3443
ARSC2
(NRULE_0018)
Arsenate reductaseACP_3442
Beta-lactam antibiotic resistance(NFUNC_0033)
RequireA
BLAA
(NRULE_0122)
Beta-lactamase class AACP_3424
Metal-binding protein(NFUNC_0105)
RequireA
MOP
(NRULE_0322)
Putative molybdenum-binding proteinACP_0227
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinACP_0006 ACP_0008 ACP_0226 ACP_2404 ACP_0007
Molybdate transport (ABC transporter)(NFUNC_0097)
RequireA
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinACP_0008 ACP_0226 ACP_2404 ACP_0006 ACP_0007
Participant 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinACP_0225
 
MODC
(NRULE_0326)
Molybdate ABC transporter ATP-binding proteinACP_0224
Penicillin resistance(NFUNC_0047)
RequireA
BLAA
(NRULE_0122)
Beta-lactamase class AACP_3424
Trehalose biosynthesis (from maltooligosaccharide)(NFUNC_0037)
RequireA
TREY
(NRULE_0140)
Maltooligosyl trehalose synthaseACP_2719
TREZ
(NRULE_0141)
Malto-oligosyltrehalose trehalohydrolaseACP_2720
Participant 
GLGX
(NRULE_0139)
Glycogen debranching enzymeACP_0709
Trehalose biosynthesis (from maltose)(NFUNC_0034)
RequireB
TRES
(NRULE_0128)
Trehalose synthaseACP_0842
Vitamin B6 biosynthesis (PdxS/PdxT pathway)(NFUNC_0059)
RequireA
PDXS
(NRULE_0206)
Pyridoxal biosynthesis lyase PdxSACP_0459
PDXT
(NRULE_0207)
Glutamine amidotransferase subunit PdxTACP_0458

Genomic Overview

BioProject IDPRJNA28085
Locus_tag
INSDC entriesCP001472
Sequence statusComplete
Current status
Contig number1
Size(bp) 4,127,356
Gene 3,382
Finishing goal
Assembly method
Coverage
Technology
Reference
  • Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils. (Appl Environ Microbiol. 2009) PMID: 19201974

Data Download

Genomic nucleotide sequence Nucleotide sequence of the coding regions Translation of the coding sequneces List of genes / ORFs
FASTA
gz		 FASTA
gz		 FASTA
gz		 TSV
uncompressed
1.2 MB 1.1 MB 762.5 KB 261.9 KB