Rule : Coenzyme PQQ synthesis protein D (PQQD)

Rule Description

ID	NRULE_0093
Rule name	PQQD
Created	2012-12-13
Protein name	Protein name Full Coenzyme PQQ synthesis protein D Synonym Full Pyrroloquinoline quinone biosynthesis protein D
Gene name	pqqD
Rule Trigger	HAMAP; MF_00655; hit=1
Cross Reference	Gene Ontology GO GO:0048038, F:quinone binding, IEA:InterPro GO:0018189, P:pyrroloquinoline quinone biosynthetic process, IEA:UniProtKB-KW Phylogenomic databases eggNOG NOG41936, - HOGENOM HOG000217936, - KO K06138, - ProtClustDB CLSK451644, - Enzyme and pathway databases UniPathway UPA00539, - Family and domain databases HAMAP MF_00655, PQQ_syn_PqqD, 1, - InterPro IPR008792, PQQ_synth_PqqD IPR022479, PQQ_synth_PqqD_bac Pfam PF05402, PqqD, 1 TIGRFAMs TIGR03859, PQQ_PqqD, 1
Feature	Not assigned
General annotation	Pathway Cofactor biosynthesis; pyrroloquinoline quinone biosynthesis Sequence similarities Belongs to the PqqD family
Reference	Q8P6M8 Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25). 12024217 Comparison of the genomes of two Xanthomonas pathogens with differing host specificities. (Nature. 2002) P27506 Klebsiella pneumoniae. 1313537 Nucleotide sequence and structure of the Klebsiella pneumoniae pqq operon. (Mol Gen Genet. 1992) 7665488 Synthesis of pyrroloquinoline quinone in vivo and in vitro and detection of an intermediate in the biosynthetic pathway. (J Bacteriol. 1995)

Function name
Pyrroloquinoline quinone biosynthesis


Scientific name	NBRC No.	CDS	Product name
Bradyrhizobium diazoefficiens	14792	blr6738	putative pyrroloquinoline quinone synthesis protein D
Cystobacter fuscus	100088	D187_002723	Coenzyme PQQ synthesis protein D
Enterobacter aerogenes	13534	EAE_19570	pyrroloquinoline quinone synthesis protein D
Enterobacter hormaechei	105718	HMPREF9086_0391	coenzyme PQQ synthesis protein D (pyrroloquinoline quinone biosynthesis protein D)
Klebsiella pneumoniae	14438	KPR_2417
Klebsiella pneumoniae subsp. rhinoscleromatis	105682	HMPREF0484_4542	coenzyme PQQ biosynthesis protein PqqD
Pseudomonas putida	100650	PP_0377	coenzyme PQQ synthesis protein D
Pseudomonas putida	100650	PP_2681	coenzyme PQQ synthesis protein D, putative
Pseudomonas stutzeri	14165	PSTAB_1969	pyrroloquinoline quinone biosynthesis protein PqqD
Rahnella aquatilis	105701	Rahaq2_4822	coenzyme PQQ biosynthesis protein PqqD
Serratia odorifera	102598	HMPREF0758_3729	coenzyme PQQ biosynthesis protein PqqD
Thauera linaloolentis	102519	C666_10725	PqqD protein