FR008_00050
FR008_00060 : CDS information
Location
| Organism | Streptomyces sp. |
|---|---|
| Strain | FR-008 |
| Entry name | FR-008 |
| Contig | AY310323 |
| Start / Stop / Direction | 13,315 / 10,298 / - [in whole cluster] 13,315 / 10,298 / - [in contig] |
| Location | complement(10298..13315) [in whole cluster] complement(10298..13315) [in contig] |
| Type | CDS |
| Length | 3,018 bp (1,005 aa) |
Annotation
| Category | 4.1 transcriptional regulator |
|---|---|
| Product | LuxR family transcriptional regulator |
| Product (GenBank) | FscRIV |
| Gene | |
| Gene (GenBank) | fscRIV |
| EC number | |
| Keyword | |
| Note | |
| Note (GenBank) |
|
| Reference |
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| Related Reference |
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Sequence
>LuxR family transcriptional regulator [FscRIV] MWLRWAGDRSRGAAPGRSGSAGPPSLAPSDARESPVPHRSRAVPPAPPLVGRAHQLDVLA RHADAARAGRPRLVLLDGPAGIGKTALLRAALAEDGPLAGMTTLYGSCRAVDVATGYSGV RALFGGLGLTGRKGRTSPLLVGGARRALPALAADPGELDADPGSTFSVLQGLYWLAANLM ADGPLVLVLDDVHWCDERSLRWLDFLLRRADGLPLLVVAAHRTGTGLTAPDALADLVAHH LPASLGLGPLDTAEVAELTAHSFPEQDPLPSFVGRLLSVTGGSPLEIVRLLRDLRSAGLG PDDTGTARLAQAGGKVVAASVRGVLEHQPDWVRQVARAVAVLGDEDRTYLAALGRVSVVH VEEAVEILRDAGLIHPGHLELSHDLVRAAVLDAVGASGVAVLRRRAARLLSDVGRSPEEI ATQLLLVPGTPDDWAVSVLRDAAAQAEQRGACEAAARYLERVREAEPKDPDVLSRLGKAL AETDPARSVTLLHEAHSLTTDVRARAATAVQLGLTCLAVQQSPDGARALTEALDALDAEL GPEPEPADRELRTLTESALLIVGSDEKATLPDILRRTEGLTPQPGDTPAQRQQLAMLSVL SAAEGGGAEETVGRARRALRAPGVPLGVWSLLPTSLALSLADENEAAEEVLETVLRGSGD TAAVWTYVLALSTRSLFRLENGAVPDAMADAQTALEILGQERWGDTATMPHTAYASVLTE RGDPGRALEALDAIKRPHLDRFVWEYHWYLMARGRALAADGDLDGALQVFGSCGASMAEA GLTNPVLAPWWLETACLLGEAGRGEEAGRAAAHGTRLAERWGTRRALGYAALARGAAARG TARTGALREAVALLADSPARSGHARGLLLLGRALVEDGAVREGREHLREAVGLARRCGCV ALARRARDELIAAGGRMREVTASPLDMLTGTERTVAGLVASGAGNREVAESLFVTVRTVE LHLTSVYRKLGVARRGDLTEALREAGATARPAAERRPGHAKRRNP
>LuxR family transcriptional regulator [FscRIV] ATGTGGCTCCGGTGGGCAGGTGACCGGTCCCGGGGCGCCGCCCCGGGCCGTTCCGGTTCC GCCGGGCCGCCGTCCCTGGCCCCGTCCGACGCGAGGGAGAGCCCTGTGCCTCACCGGTCC CGTGCCGTGCCCCCGGCCCCGCCCCTCGTCGGCAGGGCCCACCAGCTCGACGTCCTCGCC CGGCACGCGGACGCCGCCCGCGCGGGAAGACCCCGCCTGGTGCTCCTGGACGGTCCCGCC GGAATCGGCAAGACCGCACTGCTGCGCGCCGCCCTGGCCGAGGACGGCCCCCTCGCCGGC ATGACCACCCTGTACGGCTCCTGCCGCGCCGTCGACGTCGCCACGGGCTACAGCGGGGTC CGCGCCCTGTTCGGCGGACTCGGCCTGACCGGCCGCAAGGGCCGTACCTCGCCGCTCCTT GTCGGCGGCGCCCGGCGCGCGCTGCCCGCCCTCGCCGCCGACCCGGGGGAGCTGGACGCC GACCCCGGCAGCACCTTCTCCGTCCTCCAGGGCCTGTACTGGCTCGCGGCCAACCTCATG GCGGACGGCCCCCTGGTGCTCGTCCTCGACGACGTCCACTGGTGCGACGAGCGGTCCCTG CGCTGGCTCGACTTCCTGCTGCGCCGCGCGGACGGCCTGCCGCTGCTCGTCGTCGCCGCC CACCGCACCGGCACCGGCCTCACCGCTCCCGACGCCCTCGCCGACCTGGTCGCCCACCAC CTGCCGGCCTCACTCGGGCTCGGCCCGCTGGACACCGCCGAGGTGGCGGAGCTGACCGCC CACTCCTTCCCGGAGCAGGACCCCCTGCCGTCGTTCGTCGGCCGCCTCCTCTCCGTGACC GGCGGCAGCCCGCTGGAGATCGTCCGGCTCCTGCGCGACCTGCGCTCCGCCGGACTGGGC CCCGACGACACCGGGACGGCACGCCTCGCCCAGGCCGGCGGGAAGGTCGTCGCCGCCTCC GTCCGGGGTGTGCTGGAACACCAGCCGGACTGGGTGCGCCAGGTCGCGCGTGCCGTGGCC GTGCTCGGCGACGAGGACCGGACGTACCTGGCCGCCCTCGGCAGGGTCTCCGTCGTCCAC GTGGAGGAGGCCGTGGAGATCCTGCGCGACGCCGGGCTGATCCACCCCGGCCACCTGGAG CTCTCCCACGACCTGGTGCGCGCCGCGGTCCTCGACGCCGTCGGCGCGTCGGGCGTCGCC GTCCTGCGCAGACGCGCCGCCCGGCTCCTCAGCGACGTCGGACGGTCCCCCGAGGAGATC GCCACGCAGCTGCTGCTGGTCCCGGGCACCCCCGACGACTGGGCGGTCTCCGTGCTCCGG GACGCCGCCGCCCAGGCCGAACAGCGCGGCGCCTGTGAGGCCGCCGCCCGCTACCTGGAG CGCGTCCGCGAGGCCGAGCCGAAGGACCCCGACGTCCTCTCCCGGCTCGGCAAGGCGCTG GCCGAGACCGACCCGGCCCGCTCGGTGACCCTGCTGCACGAGGCCCACTCCCTGACCACG GACGTCCGCGCCCGCGCCGCCACAGCGGTTCAGCTGGGCCTGACCTGCCTCGCCGTGCAG CAGTCGCCGGACGGTGCCCGGGCCCTCACCGAGGCGCTGGACGCCCTCGACGCCGAGCTG GGTCCCGAGCCCGAACCCGCCGACCGCGAACTGCGCACCCTCACGGAGTCGGCCCTGCTG ATCGTGGGCTCCGACGAGAAGGCCACCCTGCCCGACATCCTGCGCCGGACCGAGGGCCTC ACCCCGCAGCCGGGGGACACCCCCGCCCAGCGTCAGCAACTCGCCATGCTGAGTGTGCTC TCCGCCGCCGAGGGCGGGGGAGCGGAGGAGACCGTGGGCCGGGCCCGCCGCGCGCTGCGC GCCCCCGGGGTGCCGCTGGGCGTCTGGTCACTGCTGCCCACCTCGCTCGCCCTGTCGCTG GCCGACGAGAACGAGGCCGCCGAGGAGGTCCTGGAGACCGTGCTGCGCGGCAGCGGCGAC ACCGCCGCGGTCTGGACGTACGTGCTCGCGCTCTCCACCCGGTCGCTGTTCCGCCTGGAG AACGGGGCGGTGCCGGACGCGATGGCCGACGCGCAGACCGCGCTGGAGATCCTCGGCCAG GAACGCTGGGGCGACACCGCCACGATGCCGCACACGGCGTACGCCTCCGTCCTCACCGAG CGGGGTGATCCGGGGCGCGCGCTGGAGGCGCTGGACGCCATCAAACGCCCCCACCTGGAC CGGTTCGTCTGGGAGTACCACTGGTACCTGATGGCGCGTGGCCGGGCGCTTGCCGCCGAC GGCGACCTGGACGGAGCCCTGCAGGTCTTCGGGTCCTGCGGCGCCTCGATGGCGGAGGCC GGACTCACCAACCCGGTCCTCGCGCCGTGGTGGCTGGAGACGGCCTGTCTGCTGGGCGAG GCCGGACGCGGCGAGGAGGCGGGGCGGGCCGCCGCGCACGGCACCCGGCTCGCCGAACGC TGGGGCACCCGCCGGGCCCTGGGGTACGCCGCGCTCGCCCGGGGCGCGGCGGCGCGCGGC ACGGCGCGCACCGGGGCGCTGCGGGAGGCGGTCGCCCTGCTGGCGGACTCGCCCGCGCGG AGCGGGCACGCCCGCGGCCTGTTGCTGCTGGGACGCGCCCTGGTGGAGGACGGGGCCGTG CGGGAGGGCCGGGAGCATCTACGGGAGGCCGTCGGGCTGGCCCGGCGGTGCGGGTGCGTC GCCCTCGCCCGGCGCGCCCGCGACGAGCTGATCGCGGCCGGCGGACGGATGCGCGAGGTC ACCGCCTCACCGCTGGACATGCTCACCGGCACCGAGCGCACCGTGGCCGGGCTGGTCGCC TCGGGCGCCGGCAACCGCGAAGTGGCGGAATCCCTCTTCGTCACCGTGCGGACCGTGGAA CTCCACCTCACCAGCGTCTACCGGAAACTGGGAGTCGCCCGCCGGGGCGATCTGACCGAG GCCCTGCGCGAGGCCGGCGCCACCGCCCGGCCGGCTGCGGAGAGGCGGCCGGGACATGCG AAGCGGAGAAATCCATAG
Feature
| BLASTP Database:UniProtKB:2011_09 |
|
|---|---|
| InterPro Database:interpro:38.0 |
IPR000792 Transcription regulator LuxR, C-terminal (Domain)
IPR011990 Tetratricopeptide-like helical (Domain)
IPR011991 Winged helix-turn-helix transcription repressor DNA-binding (Domain)
IPR016032 Signal transduction response regulator, C-terminal effector (Domain)
|
| SignalP | No significant hit |
| TMHMM | No significant hit |
![[928-942] 4.79999776836274e-08 PR00038](../../img/F.gif "[928-942] 4.79999776836274e-08 PR00038"){kind=small}
![[921-986] PS50043](../../img/M.gif "[921-986] PS50043"){kind=small}
![[926-979] 7.90000000000001e-12 PF00196](../../img/H.gif "[926-979] 7.90000000000001e-12 PF00196"){kind=small}
![[925-982] 8.90000829418053e-19 SM00421](../../img/R.gif "[925-982] 8.90000829418053e-19 SM00421"){kind=small}
![[942-969] PS00622](../../img/P.gif "[942-969] PS00622"){kind=small}
![[361-390] 3.8e-13 G3DSA:1.25.40.10](../../img/X2.gif "[361-390] 3.8e-13 G3DSA:1.25.40.10"){kind=small}
![[906-992] 2.70000183580794e-16 SSF46894](../../img/B.gif "[906-992] 2.70000183580794e-16 SSF46894"){kind=small}
