A4092_00270
A4092_00280 : CDS information
Location
| Organism | Nonomuraea sp. |
|---|---|
| Strain | ATCC 39727 |
| Entry name | A40926 |
| Contig | AJ561198 |
| Start / Stop / Direction | 50,332 / 49,070 / - [in whole cluster] 50,332 / 49,070 / - [in contig] |
| Location | complement(49070..50332) [in whole cluster] complement(49070..50332) [in contig] |
| Type | CDS |
| Length | 1,263 bp (420 aa) |
Annotation
| Category | 5.1 general function |
|---|---|
| Product | putative two-component system histidine kinase |
| Product (GenBank) | putative sensory kinase |
| Gene | |
| Gene (GenBank) | dbv22 |
| EC number | |
| Keyword | |
| Note | |
| Note (GenBank) | |
| Reference |
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| Related Reference |
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Sequence
>putative two-component system histidine kinase [putative sensory kinase] MAHRLRRLTTAFRSVRLRLTLVYGALFAASGVVLLAITYLLFRGSRPFVLVDGDPGGRFR AFARQQQAAILENLLFQSLIALALMTVISFLLGWLVAGRMLRPLRTMNTTLKRISARNVH ERLALPGPRDELRNLADTVDELLERLHSALDAQKRFVANAAHELRTPLTLEHALLEESLL HRDADTPSMRSIMERLLDLSRQQGRLLESLLTLAKSEGGLDHREPLDLAEIAEHTIRTME GTGPGADGNNPRAGVSADRRADGNSPTAGAATDSWADGKSLRAGCPHPRLVTGIAHAPTT GDPALVERLITNLLDNAMRYNVPGGQVELSTRAEAGKAVVSIANTGPVVPPEQVHRLFEP FQRLDRTRADDHHGLGLSIVRAIAVAHDATLTAHARPQGGLSVEIHFPLMRRALRRLAPS
>putative two-component system histidine kinase [putative sensory kinase] GTGGCCCATCGTCTCCGACGCCTGACAACAGCCTTCCGCAGCGTACGGCTGCGCCTCACG CTCGTCTACGGCGCGTTGTTCGCCGCCTCAGGGGTGGTCCTGCTCGCCATCACCTACCTG CTCTTCCGCGGCTCCAGACCCTTCGTGCTGGTGGACGGTGACCCTGGCGGCAGGTTCCGC GCCTTCGCGCGGCAGCAGCAGGCGGCCATTCTGGAGAACCTGCTGTTCCAATCGCTGATC GCGCTGGCCCTGATGACGGTCATCTCGTTCTTGCTCGGCTGGCTGGTGGCAGGCAGGATG CTGCGCCCGCTACGGACGATGAACACCACGCTCAAGCGGATCTCCGCCCGCAACGTCCAC GAGCGGCTCGCCCTGCCCGGCCCGCGCGACGAGCTGCGCAACCTCGCCGACACGGTGGAC GAGCTGCTGGAACGTCTCCACAGCGCCCTCGACGCGCAGAAGCGCTTCGTCGCCAACGCG GCCCACGAGCTGCGCACCCCGCTCACCCTGGAGCACGCGTTGCTGGAGGAGAGCCTCCTG CATCGGGACGCCGACACCCCGTCCATGCGATCGATCATGGAGCGGCTGCTCGACCTCAGC CGGCAGCAGGGGCGCCTGCTGGAATCGCTGCTGACGCTGGCCAAGAGCGAGGGCGGCCTC GATCACCGCGAGCCCCTGGATCTGGCGGAGATCGCCGAGCACACGATCCGCACGATGGAG GGGACCGGCCCCGGGGCTGACGGGAACAACCCCAGGGCCGGCGTGAGTGCCGATCGGAGG GCTGACGGGAACAGCCCCACGGCCGGCGCGGCAACCGATTCCTGGGCCGACGGGAAGTCC CTCCGGGCCGGTTGCCCACACCCCCGATTGGTGACCGGGATCGCTCATGCCCCCACCACG GGCGACCCGGCACTGGTCGAACGACTCATCACCAACCTTCTGGACAACGCCATGCGCTAC AACGTGCCTGGCGGCCAGGTGGAGCTCTCCACCCGGGCCGAGGCCGGGAAGGCCGTCGTC TCCATCGCCAACACCGGCCCGGTGGTGCCCCCCGAGCAGGTCCACCGCCTCTTCGAGCCC TTCCAGCGGCTCGACCGCACCCGCGCCGACGACCACCACGGCCTCGGGCTGTCCATCGTC CGCGCCATCGCCGTCGCCCACGACGCCACGTTGACCGCGCACGCGCGCCCGCAGGGTGGC CTCTCGGTAGAGATCCACTTCCCCCTCATGCGGCGCGCGCTGCGCCGGCTGGCGCCATCC TAG
Feature
| BLASTP Database:UniProtKB:2011_09 |
|
|---|---|
| InterPro Database:interpro:38.0 |
IPR003594 ATPase-like, ATP-binding domain (Domain)
IPR003660 HAMP linker domain (Domain)
IPR003661 Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (Domain)
IPR005467 Signal transduction histidine kinase, core (Domain)
IPR009082 Signal transduction histidine kinase, homodimeric (Domain)
|
| SignalP | No significant hit |
| TMHMM |  ![[20-42] Transmembrane (i-o)](../../img/C.gif "[20-42] Transmembrane (i-o)"){kind=small} ![[75-97] Transmembrane (o-i)](../../img/G.gif "[75-97] Transmembrane (o-i)"){kind=small} |
![[302-409] 2.3e-21 PF02518](../../img/H.gif "[302-409] 2.3e-21 PF02518"){kind=small}
![[301-411] 8.5999877623955e-32 SM00387](../../img/R.gif "[301-411] 8.5999877623955e-32 SM00387"){kind=small}
![[261-409] 1.99999636034521e-29 SSF55874](../../img/B.gif "[261-409] 1.99999636034521e-29 SSF55874"){kind=small}
![[296-411] 7.5e-29 G3DSA:3.30.565.10](../../img/X2.gif "[296-411] 7.5e-29 G3DSA:3.30.565.10"){kind=small}
![[98-151] PS50885](../../img/M.gif "[98-151] PS50885"){kind=small}
