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微生物 : Brevundimonas subvibrioides

微生物株情報

NBRC番号 16000
学名 Brevundimonas subvibrioides
別名（シノニム） Caulobacter subvibrioides
由来 IFO 16000 <- ATCC 15264 <- J. Stove, CB 81
他保存機関番号 ATCC 15264=CIP 106453=DSM 4735=LMG 14903=VKM B-1503
他株番号 CB 81
参考文献
10425763
Phylogeny and polyphasic taxonomy of Caulobacter species. Proposal of Maricaulis gen. nov. with Maricaulis maris (Poindexter) comb. nov. as the type species, and emended description of the genera Brevundimonas and Caulobacter. (Int J Syst Bacteriol. 1999)
14220656
BIOLOGICAL PROPERTIES AND CLASSIFICATION OF THE CAULOBACTER GROUP. (Bacteriol Rev. 1964)

推定保有機能 >>詳細

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タイプパターン 構成遺伝子 該当CDS
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemaseBresu_1809
Ampicillin resistance(NFUNC_0046)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class ABresu_1970 Bresu_2808
Anthranilate biosynthesis(NFUNC_0038)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseBresu_2141
TRPE
(NRULE_0143)
Anthranilate synthase component IBresu_2139
Bacitracin resistance(NFUNC_0022)
必須A
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseBresu_3140
Beta-lactam antibiotic resistance(NFUNC_0033)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class ABresu_2808 Bresu_1970
Bioplastic degradation(NFUNC_0015)
必須A
PHAZ1
(NRULE_0023)
Intracellular poly(3-hydroxyalkanoate) depolymeraseBresu_0523
B
PHAZ2
(NRULE_0080)
Poly(3-hydroxyalkanoate) depolymeraseBresu_2892
Bioplastic synthesis(NFUNC_0001)
必須A
PHAC1
(NRULE_0010)
Poly(3-hydroxyalkanoate) polymeraseBresu_1909
任意 
PHAB
(NRULE_0011)
Acetoacetyl-CoA reductaseBresu_0821
 
PHAP1
(NRULE_0374)
PhasinBresu_1461
Metal-binding protein(NFUNC_0105)
必須C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinBresu_0112
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinBresu_0112
任意 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinBresu_0114
 
MODC
(NRULE_0326)
Molybdate ABC transporter ATP-binding proteinBresu_0115
(R)-pantothenate biosynthesis(NFUNC_0030)
必須A
PAND
(NRULE_0115)
Aspartate 1-decarboxylaseBresu_2790
PANB
(NRULE_0116)
3-methyl-2-oxobutanoate hydroxymethyltransferaseBresu_2538
PANE
(NRULE_0117)
2-dehydropantoate 2-reductaseBresu_2767
PANC
(NRULE_0118)
Pantothenate synthetaseBresu_1576
Penicillin resistance(NFUNC_0047)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class ABresu_1970 Bresu_2808
Phytic acid hydrolysis(NFUNC_0085)
必須A
PHYT
(NRULE_0258)
3-phytaseBresu_0547

ゲノム配列情報

BioProject IDPRJNA36643
ローカスタグBRESU
INSDC entriesCP002102
ステータスComplete
解析状況Finished
コンティグ数1
サイズ(bp) 3,445,263
遺伝子数 3,327
フィニッシングゴールFinished
アセンブル方法Newbler v. 2.3
冗長度
シーケンス方法
  • 454
  • Illumina
参考文献

データダウンロード

ゲノム塩基配列 CDS塩基配列 CDSアミノ酸変換配列 遺伝子/ORF リスト
FASTA
gz		 FASTA
gz		 FASTA
gz		 TSV
uncompressed
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