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微生物 : Cellulomonas flavigena

微生物株情報

NBRC番号 3775
学名 Cellulomonas flavigena
別名（シノニム） 該当データなし
由来 IFO 3775 <- BUCSAV 180 <- NCIB 8073 <- USDA 134 (N.R. Smith)
他保存機関番号 ATCC 482=BCRC 11376=CCM 1926=CCUG 12162=CCUG 28996=CFBP 4223=CGMCC 1.1914=CIP 82.10=DSM 20109=IAM 12109=IMET 10357=IMSMU 21278=KCCM 21192=KCTC 1038=KCTC 9104=LMG 16263=NBRC 3754=NCAIM B.01383=NCIMB 8073=PCM 2333=VKM Ac-1137
他株番号 134=BUCSAV 180
参考文献
該当データなし

推定保有機能 >>詳細

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タイプパターン 構成遺伝子 該当CDS
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemaseCfla_2600 Cfla_0532
Aminoglycoside resistance (by aminoglycoside O-nucleotidyltransferase)(NFUNC_0042)
必須C
ANT2
(NRULE_0153)
2''-aminoglycoside nucleotidyltransferaseCfla_3641 Cfla_0433
Aminoglycoside resistance (by aminoglycoside O-phosphotransferase)(NFUNC_0043)
必須B
APH3
(NRULE_0156)
Aminoglycoside 3'-phosphotransferaseCfla_1184
Anthranilate biosynthesis(NFUNC_0038)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseCfla_0024
TRPE
(NRULE_0143)
Anthranilate synthase component ICfla_1992
Bacitracin resistance(NFUNC_0022)
必須A
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseCfla_2011
Beta-lactam antibiotic resistance(NFUNC_0033)
必須D
BLAD
(NRULE_0125)
Beta-lactamase class DCfla_3460
Bioplastic degradation(NFUNC_0015)
必須B
PHAZ2
(NRULE_0080)
Poly(3-hydroxyalkanoate) depolymeraseCfla_2509
Freeze resistance (by antifreeze protein)(NFUNC_0019)
必須A
AFP
(NRULE_0089)
Ice-structuring proteinCfla_2847
Gentamicin resistance(NFUNC_0053)
必須A
ANT2
(NRULE_0153)
2''-aminoglycoside nucleotidyltransferaseCfla_0433 Cfla_3641
Kanamycin resistance(NFUNC_0052)
必須B
ANT2
(NRULE_0153)
2''-aminoglycoside nucleotidyltransferaseCfla_3641 Cfla_0433
C
APH3
(NRULE_0156)
Aminoglycoside 3'-phosphotransferaseCfla_1184
Mercury resistance(NFUNC_0005)
必須A
MERA
(NRULE_0008)
Mercuric reductaseCfla_3663
Metal-binding protein(NFUNC_0105)
必須A
MOP
(NRULE_0322)
Putative molybdenum-binding proteinCfla_1752
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinCfla_1751
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinCfla_1751
任意 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinCfla_1750
Penicillin resistance(NFUNC_0047)
必須B
BLAD
(NRULE_0125)
Beta-lactamase class DCfla_3460
Trehalose biosynthesis (from maltooligosaccharide)(NFUNC_0037)
必須A
TREY
(NRULE_0140)
Maltooligosyl trehalose synthaseCfla_1742
TREZ
(NRULE_0141)
Malto-oligosyltrehalose trehalohydrolaseCfla_1741
任意 
GLGX
(NRULE_0139)
Glycogen debranching enzymeCfla_1101 Cfla_1743
Trehalose biosynthesis (from maltose)(NFUNC_0034)
必須B
TRES
(NRULE_0128)
Trehalose synthaseCfla_1096
Trehalose biosynthesis (from NDP-glucose and glucose-6-phosphate)(NFUNC_0031)
必須A
TPS
(NRULE_0119)
Trehalose-phosphate synthaseCfla_0676
TPP
(NRULE_0120)
Trehalose-6-phosphate phosphataseCfla_0675
Vitamin B6 biosynthesis (PdxS/PdxT pathway)(NFUNC_0059)
必須A
PDXS
(NRULE_0206)
Pyridoxal biosynthesis lyase PdxSCfla_1789
PDXT
(NRULE_0207)
Glutamine amidotransferase subunit PdxTCfla_1792

ゲノム配列情報

BioProject IDPRJNA19707
ローカスタグCFLA
INSDC entriesCP001964
ステータスComplete
解析状況
コンティグ数1
サイズ(bp) 4,123,179
遺伝子数 3,678
フィニッシングゴール
アセンブル方法
冗長度
シーケンス方法
参考文献
  • Complete genome sequence of Cellulomonas flavigena type strain (134). (Stand Genomic Sci. 2010) PMID: 21304688

データダウンロード

ゲノム塩基配列 CDS塩基配列 CDSアミノ酸変換配列 遺伝子/ORF リスト
FASTA
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gz		 FASTA
gz		 TSV
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