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微生物 : Synechocystis sp.

微生物株情報

NBRC番号 該当データなし
学名 Synechocystis sp.
別名（シノニム） 該当データなし
由来
他保存機関番号 PCC 6803
他株番号
参考文献
23069868
Microevolution in cyanobacteria: re-sequencing a motile substrain of Synechocystis sp. PCC 6803. (DNA Res. 2012)

推定保有機能 >>詳細

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タイプパターン 構成遺伝子 該当CDS
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemaseslr0827
Anthranilate biosynthesis(NFUNC_0038)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseslr0055
TRPE
(NRULE_0143)
Anthranilate synthase component Islr0738
Arsenical resistance(NFUNC_0004)
必須F
ARSB2
(NRULE_0016)
Arsenite resistance protein ArsBslr0944
ARSC3
(NRULE_0019)
Arsenate reductaseslr0946
任意 
ARSA
(NRULE_0014)
Arsenical pump-driving ATPasesll0086
 
ARSH
(NRULE_0021)
ArsH proteinslr0945
Bacitracin resistance(NFUNC_0022)
必須A
UPPP
(NRULE_0097)
Undecaprenyl-diphosphatasesll0210
Beta-lactam antibiotic resistance(NFUNC_0033)
必須D
BLAD
(NRULE_0125)
Beta-lactamase class Dslr0319
Bioplastic synthesis(NFUNC_0001)
必須B
PHAE
(NRULE_0012)
Poly(3-hydroxyalkanoate) polymerase PhaE subunitslr1829
PHAC2
(NRULE_0373)
Poly(3-hydroxyalkanoate) polymerase PhaC subunitslr1830
Chloramphenicol resistance(NFUNC_0025)
必須A
CAT1
(NRULE_0107)
Chloramphenicol acetyltransferaseslr0299
GABA biosynthesis(NFUNC_0066)
必須A
GAD
(NRULE_0231)
Glutamate decarboxylasesll1641
Metal-binding protein(NFUNC_0105)
必須A
MOP
(NRULE_0322)
Putative molybdenum-binding proteinslr1224 slr1455
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinslr0513 slr1452 sll0738
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinsll0738 slr1452 slr0513
任意 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinsll0739
 
MODC
(NRULE_0326)
Molybdate ABC transporter ATP-binding proteinslr1455 sll0739
Penicillin resistance(NFUNC_0047)
必須B
BLAD
(NRULE_0125)
Beta-lactamase class Dslr0319
Riboflavin biosynthesis(NFUNC_0058)
必須A
RIBB
(NRULE_0200)
3,4-dihydroxy-2-butanone 4-phosphate synthasesll1894
RIBA
(NRULE_0201)
GTP cyclohydrolase-2sll1894
RIBD
(NRULE_0202)
Riboflavin biosynthesis protein RibDslr0066
RIBH
(NRULE_0203)
6,7-dimethyl-8-ribityllumazine synthasesll1282
RIBE
(NRULE_0204)
Riboflavin synthasesll0300
任意 
RIBF
(NRULE_0205)
Riboflavin biosynthesis protein RibFslr1882
Streptogramin resistance(NFUNC_0027)
必須A
VAT
(NRULE_0113)
Streptogramin A acetyltransferasesll1900

ゲノム配列情報

BioProject IDPRJNA60
ローカスタグSGL
INSDC entriesBA000022
ステータスComplete
解析状況
コンティグ数5
サイズ(bp) 3,947,019
遺伝子数 3,564
フィニッシングゴール
アセンブル方法
冗長度
シーケンス方法
参考文献
  • Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. I. Sequence features in the 1 Mb region from map positions 64% to 92% of the genome. (DNA Res. 1995) PMID: 8590279
  • Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions. (DNA Res. 1996) PMID: 8905231

データダウンロード

ゲノム塩基配列 CDS塩基配列 CDSアミノ酸変換配列 遺伝子/ORF リスト
FASTA
gz		 FASTA
gz		 FASTA
gz		 TSV
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1.2 MB 2.2 MB 705.2 KB 251.7 KB