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微生物 : Staphylococcus saprophyticus subsp. saprophyticus

微生物株情報

NBRC番号 102446
学名 Staphylococcus saprophyticus subsp. saprophyticus
別名（シノニム） Staphylococcus saprophyticus
由来 IAM 12452 <- Sanraku-Ocean Co., Ltd. (K. Kouno) <- NCIB 8711 <- NCTC 7292 <- S.T. Cowan, S-41
他保存機関番号 ATCC 15305=ATCC 19701=BCRC 10786=CCM 883=CCUG 3706=CECT 235=CIP 76.125=DSM 20229=IAM 12452=JCM 2427=LMG 13350=MTCC 6155=NCAIM B.01067=NCCB 73011=NCFB 948=NCIB 8711=NCIMB 8711=NCTC 7292=NRRL B-14751
他株番号
参考文献
14908038
Staphylococci and their classification. (J Gen Microbiol. 1951)
16135568
Whole genome sequence of Staphylococcus saprophyticus reveals the pathogenesis of uncomplicated urinary tract infection. (Proc Natl Acad Sci U S A. 2005)

推定保有機能 >>詳細

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タイプパターン 構成遺伝子 該当CDS
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemaseSSP0807
Aminoglycoside resistance (by aminoglycoside O-nucleotidyltransferase)(NFUNC_0042)
必須A
ANT6
(NRULE_0151)
Aminoglycoside 6-adenylyltransferaseSSP1924
Ampicillin resistance(NFUNC_0046)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class ASSP2186
Arginine degradation(NFUNC_0074)
必須A
ARGI
(NRULE_0239)
ArginaseSSP0721
Aromatic azo compounds degradation(NFUNC_0073)
必須B
AZR
(NRULE_0237)
NADPH azoreductaseSSP2154
Arsenical resistance(NFUNC_0004)
必須B
ARSB1
(NRULE_0015)
Arsenical pump membrane proteinSSP2383 SSPP115
ARSC2
(NRULE_0018)
Arsenate reductaseSSPP114 SSP1633
任意 
ARSA
(NRULE_0014)
Arsenical pump-driving ATPaseSSPP118
 
ARSD
(NRULE_0020)
Arsenical resistance operon trans-acting repressor ArsDSSPP119
Bacitracin resistance(NFUNC_0022)
必須A
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseSSP2035
Beta-lactam antibiotic resistance(NFUNC_0033)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class ASSP2186
Betaine biosynthesis (from choline)(NFUNC_0049)
必須A
BETA
(NRULE_0175)
Choline dehydrogenaseSSP0196
Fosfomycin resistance(NFUNC_0023)
必須B
FOSB
(NRULE_0099)
Metallothiol transferase FosBSSP1926
Metal-binding protein(NFUNC_0105)
必須C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinSSP0632
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinSSP0632
任意 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinSSP0633
(R)-pantothenate biosynthesis(NFUNC_0030)
必須A
PAND
(NRULE_0115)
Aspartate 1-decarboxylaseSSP0933
PANB
(NRULE_0116)
3-methyl-2-oxobutanoate hydroxymethyltransferaseSSP0154
PANE
(NRULE_0117)
2-dehydropantoate 2-reductaseSSP0153 SSP0246
PANC
(NRULE_0118)
Pantothenate synthetaseSSP0155
Penicillin resistance(NFUNC_0047)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class ASSP2186
Streptomycin resistance(NFUNC_0054)
必須A
ANT6
(NRULE_0151)
Aminoglycoside 6-adenylyltransferaseSSP1924
Uptake of osmoprotectant(NFUNC_0061)
必須A
OPUAC
(NRULE_0213)
Osmoprotectant ABC transporter substrate-binding proteinSSP0453 SSP0993
OPUAB
(NRULE_0214)
Osmoprotectant ABC transporter permease proteinSSP0452 SSP0454
OPUAA
(NRULE_0215)
Osmoprotectant ABC transporter ATP-binding proteinSSP0451
C
BCCT
(NRULE_0220)
BCCT family transporterSSP0193 SSP0323 SSP0701 SSP1409
E
OPUE
(NRULE_0222)
Sodium/proline symporterSSP0889 SSP0399
Vitamin B6 biosynthesis (PdxS/PdxT pathway)(NFUNC_0059)
必須A
PDXS
(NRULE_0206)
Pyridoxal biosynthesis lyase PdxSSSP2237
PDXT
(NRULE_0207)
Glutamine amidotransferase subunit PdxTSSP2236

ゲノム配列情報

BioProject IDPRJNA15596
ローカスタグSSP
INSDC entriesAP008934
ステータスComplete
解析状況
コンティグ数3
サイズ(bp) 2,577,899
遺伝子数 2,514
フィニッシングゴール
アセンブル方法
冗長度
シーケンス方法
参考文献
  • Whole genome sequence of Staphylococcus saprophyticus reveals the pathogenesis of uncomplicated urinary tract infection. (Proc Natl Acad Sci U S A. 2005) PMID: 16135568

データダウンロード

ゲノム塩基配列 CDS塩基配列 CDSアミノ酸変換配列 遺伝子/ORF リスト
FASTA
gz		 FASTA
gz		 FASTA
gz		 TSV
uncompressed
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