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微生物 : Mobilicoccus pelagius

微生物株情報

NBRC番号 104925
学名 Mobilicoccus pelagius
別名（シノニム） 該当データなし
由来 NITE (T. Iino & T. Iwami, Aji5-31)
他保存機関番号 DSM 22762
他株番号 Aji5-31
参考文献
21282898
Mobilicoccus pelagius gen. nov., sp. nov. and Piscicoccus intestinalis gen. nov., sp. nov., two new members of the family Dermatophilaceae, and reclassification of Dermatophilus chelonae (Masters et al. 1995) as Austwickia chelonae gen. nov., comb. nov. (J Gen Appl Microbiol. 2010)

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タイプパターン 構成遺伝子 該当CDS
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemaseMOPEL_096_00730
Aminoglycoside resistance (by aminoglycoside O-phosphotransferase)(NFUNC_0043)
必須A
APH6
(NRULE_0155)
Streptomycin 6-kinaseMOPEL_013_00010
Anthranilate biosynthesis(NFUNC_0038)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseMOPEL_083_00080
TRPE
(NRULE_0143)
Anthranilate synthase component IMOPEL_029_01550
Bacitracin resistance(NFUNC_0022)
必須A
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseMOPEL_135_00230 MOPEL_096_00050
Betaine biosynthesis (from choline)(NFUNC_0049)
必須A
BETA
(NRULE_0175)
Choline dehydrogenaseMOPEL_098_00120
Macrolide antibiotic resistance(NFUNC_0045)
必須B
RLMA
(NRULE_0165)
23S rRNA (guanine-N(1))-methyltransferaseMOPEL_021_00650
Metal-binding protein(NFUNC_0105)
必須A
MOP
(NRULE_0322)
Putative molybdenum-binding proteinMOPEL_071_00200 MOPEL_071_00170 MOPEL_005_00390
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinMOPEL_071_00180 MOPEL_041_00200
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinMOPEL_071_00180 MOPEL_041_00200
任意 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinMOPEL_071_00190
Streptomycin resistance(NFUNC_0054)
必須C
APH6
(NRULE_0155)
Streptomycin 6-kinaseMOPEL_013_00010
Trehalose biosynthesis (from maltooligosaccharide)(NFUNC_0037)
必須A
TREY
(NRULE_0140)
Maltooligosyl trehalose synthaseMOPEL_005_00020
TREZ
(NRULE_0141)
Malto-oligosyltrehalose trehalohydrolaseMOPEL_005_00030
任意 
GLGX
(NRULE_0139)
Glycogen debranching enzymeMOPEL_036_00100 MOPEL_130_00060
Trehalose biosynthesis (from maltose)(NFUNC_0034)
必須B
TRES
(NRULE_0128)
Trehalose synthaseMOPEL_036_00080
Trehalose biosynthesis (from NDP-glucose and glucose-6-phosphate)(NFUNC_0031)
必須A
TPS
(NRULE_0119)
Trehalose-phosphate synthaseMOPEL_005_00420
TPP
(NRULE_0120)
Trehalose-6-phosphate phosphataseMOPEL_005_00410
Uptake of osmoprotectant(NFUNC_0061)
必須C
BCCT
(NRULE_0220)
BCCT family transporterMOPEL_098_00110 MOPEL_096_01080 MOPEL_084_00240
E
OPUE
(NRULE_0222)
Sodium/proline symporterMOPEL_113_00260
Vitamin B6 biosynthesis (PdxS/PdxT pathway)(NFUNC_0059)
必須A
PDXS
(NRULE_0206)
Pyridoxal biosynthesis lyase PdxSMOPEL_021_00580
PDXT
(NRULE_0207)
Glutamine amidotransferase subunit PdxTMOPEL_021_00560

ゲノム配列情報

BioProject IDPRJDA73367
ローカスタグMOPEL
INSDC entriesBAFE00000000
ステータスWGS
解析状況High-Quality Draft
コンティグ数97
サイズ(bp) 3,544,917
遺伝子数 3,112
フィニッシングゴールNoncontiguous Finished
アセンブル方法Newbler v. 2.6
冗長度
シーケンス方法
  • 454 GS-FLX Titanium
  • Illumina HiSeq 1000
参考文献

データダウンロード

ゲノム塩基配列 CDS塩基配列 CDSアミノ酸変換配列 遺伝子/ORF リスト
FASTA
gz		 FASTA
gz		 FASTA
gz		 TSV
uncompressed
1.0 MB 948.3 KB 648.9 KB 243.8 KB