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微生物 : Meiothermus ruber

微生物株情報

NBRC番号 106122
学名 Meiothermus ruber
別名(シノニム) Thermus ruber
由来 VKM B-1258 <- L.G, Loginova, 21
他保存機関番号 ATCC 35948=BCRC 17109=DSM 1279=NCIMB 13396=VKM B-1258
他株番号 21
参考文献
1099409
[Ecology of the obligate thermophilic bacteria]. (Mikrobiologiia. 1975)

推定保有機能 >>詳細

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タイプパターン 構成遺伝子 該当CDS
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemaseMrub_0203
Aminoglycoside resistance (by aminoglycoside N-acetyltransferase)(NFUNC_0041)
必須B
AAC6
(NRULE_0150)
Aminoglycoside N(6')-acetyltransferaseMrub_0158
Aminoglycoside resistance (by aminoglycoside O-nucleotidyltransferase)(NFUNC_0042)
必須B
ANT4
(NRULE_0152)
Kanamycin nucleotidyltransferaseMrub_0554
Anthranilate biosynthesis(NFUNC_0038)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseMrub_2938
TRPE
(NRULE_0143)
Anthranilate synthase component IMrub_2940
Arginine degradation(NFUNC_0074)
必須A
ARGI
(NRULE_0239)
ArginaseMrub_0850
Bacitracin resistance(NFUNC_0022)
必須A
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseMrub_0452
Kanamycin resistance(NFUNC_0052)
必須A
ANT4
(NRULE_0152)
Kanamycin nucleotidyltransferaseMrub_0554
任意 
AAC6
(NRULE_0150)
Aminoglycoside N(6')-acetyltransferaseMrub_0158
Metal-binding protein(NFUNC_0105)
必須A
MOP
(NRULE_0322)
Putative molybdenum-binding proteinMrub_2366 Mrub_2272
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinMrub_0284 Mrub_1923 Mrub_2015 Mrub_1201
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinMrub_1201 Mrub_1923 Mrub_0284 Mrub_2015
任意 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinMrub_1922
Phenol degradation(NFUNC_0028)
必須B
PHEA1
(NRULE_0083)
Aromatic ring hydroxylaseMrub_1332
任意 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinMrub_2869 Mrub_0721 Mrub_0244 Mrub_2685 Mrub_2067 Mrub_0844 Mrub_0780
 
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseMrub_1331
Riboflavin biosynthesis(NFUNC_0058)
必須A
RIBB
(NRULE_0200)
3,4-dihydroxy-2-butanone 4-phosphate synthaseMrub_1253
RIBA
(NRULE_0201)
GTP cyclohydrolase-2Mrub_1253
RIBD
(NRULE_0202)
Riboflavin biosynthesis protein RibDMrub_1255
RIBH
(NRULE_0203)
6,7-dimethyl-8-ribityllumazine synthaseMrub_1256
RIBE
(NRULE_0204)
Riboflavin synthaseMrub_1254
任意 
RIBF
(NRULE_0205)
Riboflavin biosynthesis protein RibFMrub_0996
Trehalose biosynthesis (from maltose)(NFUNC_0034)
必須B
TRES
(NRULE_0128)
Trehalose synthaseMrub_2716
Vitamin B6 biosynthesis (PdxS/PdxT pathway)(NFUNC_0059)
必須A
PDXS
(NRULE_0206)
Pyridoxal biosynthesis lyase PdxSMrub_1545
PDXT
(NRULE_0207)
Glutamine amidotransferase subunit PdxTMrub_1547

ゲノム配列情報

BioProject IDPRJNA28827
ローカスタグ
INSDC entriesCP001743
ステータスComplete
解析状況
コンティグ数1
サイズ(bp) 3,097,457
遺伝子数 3,014
フィニッシングゴール
アセンブル方法
冗長度
シーケンス方法
参考文献
  • Complete genome sequence of Meiothermus ruber type strain (21). (Stand Genomic Sci. 2010) PMID: 21304689

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ゲノム塩基配列 CDS塩基配列 CDSアミノ酸変換配列 遺伝子/ORF リスト
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