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微生物 : Clostridium kluyveri

微生物株情報

NBRC番号 12016
学名 Clostridium kluyveri
別名(シノニム) 該当データなし
由来 IFO 12016 <- IFO (T. Sakane, single colony isolate) <- ATCC 8527 <- H.A. Barker, K-1
他保存機関番号 ATCC 8527=DSM 555=NCIMB 10680
他株番号 K-1
参考文献
16561450
The Nutrition of Clostridium kluyveri. (J Bacteriol. 1948)

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タイプパターン 構成遺伝子 該当CDS
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemaseCKR_3160
Aminoglycoside resistance (by aminoglycoside O-nucleotidyltransferase)(NFUNC_0042)
必須A
ANT6
(NRULE_0151)
Aminoglycoside 6-adenylyltransferaseCKR_0223
D
ANT3
(NRULE_0154)
Streptomycin 3''-adenylyltransferaseCKR_2315
Ampicillin resistance(NFUNC_0046)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class ACKR_2572
Anthranilate biosynthesis(NFUNC_0038)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseCKR_1171
TRPE
(NRULE_0143)
Anthranilate synthase component ICKR_1170
Bacitracin resistance(NFUNC_0022)
必須A
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseCKR_2034 CKR_2393
Beta-lactam antibiotic resistance(NFUNC_0033)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class ACKR_2572
Macrolide antibiotic resistance(NFUNC_0045)
必須B
RLMA
(NRULE_0165)
23S rRNA (guanine-N(1))-methyltransferaseCKR_2309
Metal-binding protein(NFUNC_0105)
必須A
MOP
(NRULE_0322)
Putative molybdenum-binding proteinCKR_2729 CKR_2438
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinCKR_2732 CKR_1244
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinCKR_2732 CKR_1244
任意 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinCKR_2731
Nitrogenase(NFUNC_0094)
必須B
ANFD
(NRULE_0344)
Nitrogenase iron-iron protein alpha chainCKR_0320
ANFK
(NRULE_0345)
Nitrogenase iron-iron protein beta chainCKR_0322
ANFG
(NRULE_0346)
Nitrogenase iron-iron protein delta chainCKR_0321
VNFH
(NRULE_0353)
Nitrogenase reductaseCKR_0937 CKR_1621 CKR_0949 CKR_2726
(R)-pantothenate biosynthesis(NFUNC_0030)
必須A
PAND
(NRULE_0115)
Aspartate 1-decarboxylaseCKR_1508
PANB
(NRULE_0116)
3-methyl-2-oxobutanoate hydroxymethyltransferaseCKR_0564
PANE
(NRULE_0117)
2-dehydropantoate 2-reductaseCKR_1942
PANC
(NRULE_0118)
Pantothenate synthetaseCKR_0565
Penicillin resistance(NFUNC_0047)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class ACKR_2572
Phenol degradation(NFUNC_0028)
必須B
PHEA1
(NRULE_0083)
Aromatic ring hydroxylaseCKR_2668
任意 
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseCKR_0047 CKR_2518 CKR_2483
Riboflavin biosynthesis(NFUNC_0058)
必須A
RIBB
(NRULE_0200)
3,4-dihydroxy-2-butanone 4-phosphate synthaseCKR_1902
RIBA
(NRULE_0201)
GTP cyclohydrolase-2CKR_1902
RIBD
(NRULE_0202)
Riboflavin biosynthesis protein RibDCKR_1904
RIBH
(NRULE_0203)
6,7-dimethyl-8-ribityllumazine synthaseCKR_1901
RIBE
(NRULE_0204)
Riboflavin synthaseCKR_1903
任意 
RIBF
(NRULE_0205)
Riboflavin biosynthesis protein RibFCKR_1330
Streptomycin resistance(NFUNC_0054)
必須A
ANT6
(NRULE_0151)
Aminoglycoside 6-adenylyltransferaseCKR_0223
B
ANT3
(NRULE_0154)
Streptomycin 3''-adenylyltransferaseCKR_2315
Vitamin B6 biosynthesis (PdxS/PdxT pathway)(NFUNC_0059)
必須A
PDXS
(NRULE_0206)
Pyridoxal biosynthesis lyase PdxSCKR_2130
PDXT
(NRULE_0207)
Glutamine amidotransferase subunit PdxTCKR_2129

ゲノム配列情報

BioProject IDPRJDA33271
ローカスタグCKR
INSDC entriesAP009049
ステータスComplete
解析状況
コンティグ数2
サイズ(bp) 3,955,303
遺伝子数 3,523
フィニッシングゴール
アセンブル方法
冗長度
シーケンス方法
参考文献

データダウンロード

ゲノム塩基配列 CDS塩基配列 CDSアミノ酸変換配列 遺伝子/ORF リスト
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