Alanine racemization(NFUNC_0063) |
必須 | A | ALR (NRULE_0228) | Alanine racemase | VIOR3934_12832 |
Anthranilate biosynthesis(NFUNC_0038) |
必須 | A | GLAT (NRULE_0142) | Glutamine amidotransferase | VIOR3934_04744 VIOR3934_11582 |
TRPE (NRULE_0143) | Anthranilate synthase component I | VIOR3934_04749 |
Arsenical resistance(NFUNC_0004) |
必須 | D | ARSB2 (NRULE_0016) | Arsenite resistance protein ArsB | VIOR3934_14537 |
ARSC1 (NRULE_0017) | Arsenate reductase | VIOR3934_07818 |
Bacitracin resistance(NFUNC_0022) |
必須 | A | UPPP (NRULE_0097) | Undecaprenyl-diphosphatase | VIOR3934_09860 |
Betaine biosynthesis (from choline)(NFUNC_0049) |
必須 | A | BETA (NRULE_0175) | Choline dehydrogenase | VIOR3934_13542 |
Bioplastic synthesis(NFUNC_0001) |
必須 | A | PHAC1 (NRULE_0010) | Poly(3-hydroxyalkanoate) polymerase | VIOR3934_13842 |
任意 | | PHAB (NRULE_0011) | Acetoacetyl-CoA reductase | VIOR3934_13857 |
| PHAP1 (NRULE_0374) | Phasin | VIOR3934_13847 |
Biotin biosynthesis(NFUNC_0051) |
必須 | A | BIOF (NRULE_0182) | 8-amino-7-oxononanoate synthase | VIOR3934_03217 |
BIOA (NRULE_0183) | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase | VIOR3934_03227 |
BIOD (NRULE_0184) | ATP-dependent dethiobiotin synthetase BioD | VIOR3934_03207 |
BIOB (NRULE_0185) | Biotin synthase | VIOR3934_03222 |
Chloramphenicol resistance(NFUNC_0025) |
必須 | B | CAT4 (NRULE_0108) | Chloramphenicol acetyltransferase | VIOR3934_05254 |
Ectoine biosynthesis(NFUNC_0056) |
必須 | A | ECTB (NRULE_0186) | Diaminobutyrate--2-oxoglutarate transaminase | VIOR3934_21261 |
ECTA (NRULE_0187) | L-2,4-diaminobutyric acid acetyltransferase | VIOR3934_21266 |
ECTC (NRULE_0188) | L-ectoine synthase | VIOR3934_21256 |
Folate biosynthesis(NFUNC_0044) |
必須 | B | GLAT (NRULE_0142) | Glutamine amidotransferase | VIOR3934_04744 VIOR3934_11582 |
DHPS (NRULE_0144) | Dihydropteroate synthase | VIOR3934_00975 |
FOLA (NRULE_0147) | Dihydrofolate reductase | VIOR3934_09775 |
FOLB (NRULE_0158) | Dihydroneopterin aldolase | VIOR3934_09850 |
FOLK (NRULE_0159) | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase | VIOR3934_09855 VIOR3934_01065 |
FOLC (NRULE_0160) | Bifunctional protein FolC | VIOR3934_06279 |
PABB (NRULE_0161) | Para-aminobenzoate synthase component I | VIOR3934_04944 |
PABC (NRULE_0162) | Aminodeoxychorismate lyase | VIOR3934_16266 |
Macrolide antibiotic resistance(NFUNC_0045) |
必須 | B | RLMA (NRULE_0165) | 23S rRNA (guanine-N(1))-methyltransferase | VIOR3934_11212 |
Metal-binding protein(NFUNC_0105) |
必須 | A | MOP (NRULE_0322) | Putative molybdenum-binding protein | VIOR3934_08291 VIOR3934_00755 |
C | MODA (NRULE_0324) | Molybdate ABC transporter substrate-binding protein | VIOR3934_12680 VIOR3934_08281 VIOR3934_00815 |
E | CUER (NRULE_0328) | Copper-responsive transcriptional regulator CueR | VIOR3934_14707 |
F | SOXR (NRULE_0329) | Redox-sensitive transcriptional activator SoxR | VIOR3934_20280 |
G | ZNTR (NRULE_0330) | Zinc-responsive transcriptional regulator ZntR | VIOR3934_12762 |
I | ISCR (NRULE_0332) | Rrf2 family transcriptional regulator IscR | VIOR3934_18298 |
Molybdate transport (ABC transporter)(NFUNC_0097) |
必須 | A | MODA (NRULE_0324) | Molybdate ABC transporter substrate-binding protein | VIOR3934_12680 VIOR3934_08281 VIOR3934_00815 |
任意 | | MODB (NRULE_0325) | Molybdate ABC transporter permease protein | VIOR3934_08286 |
| MODC (NRULE_0326) | Molybdate ABC transporter ATP-binding protein | VIOR3934_08291 |
Riboflavin biosynthesis(NFUNC_0058) |
必須 | A | RIBB (NRULE_0200) | 3,4-dihydroxy-2-butanone 4-phosphate synthase | VIOR3934_19130 VIOR3934_15526 VIOR3934_14122 |
RIBA (NRULE_0201) | GTP cyclohydrolase-2 | VIOR3934_19055 VIOR3934_05004 VIOR3934_14122 |
RIBD (NRULE_0202) | Riboflavin biosynthesis protein RibD | VIOR3934_14132 |
RIBH (NRULE_0203) | 6,7-dimethyl-8-ribityllumazine synthase | VIOR3934_14117 |
RIBE (NRULE_0204) | Riboflavin synthase | VIOR3934_21551 VIOR3934_14127 |
任意 | | RIBF (NRULE_0205) | Riboflavin biosynthesis protein RibF | VIOR3934_12555 |
Uptake of osmoprotectant(NFUNC_0061) |
必須 | C | BCCT (NRULE_0220) | BCCT family transporter | VIOR3934_20365 VIOR3934_13067 VIOR3934_11197 VIOR3934_21091 |
E | OPUE (NRULE_0222) | Sodium/proline symporter | VIOR3934_19495 |
Vitamin B6 biosynthesis (PdxA/PdxJ pathway)(NFUNC_0060) |
必須 | A | EPD (NRULE_0208) | D-erythrose-4-phosphate dehydrogenase | VIOR3934_09645 |
PDXB (NRULE_0209) | Erythronate-4-phosphate dehydrogenase | VIOR3934_10145 |
SERC (NRULE_0210) | Phosphoserine aminotransferase | VIOR3934_04539 |
PDXA (NRULE_0211) | 4-hydroxythreonine-4-phosphate dehydrogenase | VIOR3934_09795 |
PDXJ (NRULE_0212) | Pyridoxine 5'-phosphate synthase | VIOR3934_16761 |