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微生物 : Sanguibacter keddieii

微生物株情報

NBRC番号 16158
学名 Sanguibacter keddieii
別名(シノニム) 該当データなし
由来 IFO 16158 <- NCIMB 703025 <- J. Garayzabal, ST-74
他保存機関番号 ATCC 51767=CCUG 36690=CECT 4540=CIP 106323=DSM 10542=JCM 11429=NCFB 3025=NCIMB 703025
他株番号 ST-74
参考文献
7765903
Phenotypic and phylogenetic characterization of some unknown coryneform bacteria isolated from bovine blood and milk: description of Sanguibacter gen.nov. (Lett Appl Microbiol. 1995)

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タイプパターン 構成遺伝子 該当CDS
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemaseSked_29250
D-allose biosynthesis(NFUNC_0077)
必須A
LRHI
(NRULE_0242)
L-rhamnose isomeraseSked_05810
Aminoglycoside resistance (by aminoglycoside O-phosphotransferase)(NFUNC_0043)
必須A
APH6
(NRULE_0155)
Streptomycin 6-kinaseSked_35670
Anthranilate biosynthesis(NFUNC_0038)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseSked_00170
TRPE
(NRULE_0143)
Anthranilate synthase component ISked_20780
Bacitracin resistance(NFUNC_0022)
必須A
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseSked_20990
Beta-lactam antibiotic resistance(NFUNC_0033)
必須D
BLAD
(NRULE_0125)
Beta-lactamase class DSked_36830
Chloramphenicol resistance(NFUNC_0025)
必須A
CAT1
(NRULE_0107)
Chloramphenicol acetyltransferaseSked_12550
Freeze resistance (by antifreeze protein)(NFUNC_0019)
必須A
AFP
(NRULE_0089)
Ice-structuring proteinSked_05680
Metal-binding protein(NFUNC_0105)
必須A
MOP
(NRULE_0322)
Putative molybdenum-binding proteinSked_31720
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinSked_01750 Sked_04160
F
SOXR
(NRULE_0329)
Redox-sensitive transcriptional activator SoxRSked_36770
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinSked_01750 Sked_04160
(R)-pantothenate biosynthesis(NFUNC_0030)
必須A
PAND
(NRULE_0115)
Aspartate 1-decarboxylaseSked_32000
PANB
(NRULE_0116)
3-methyl-2-oxobutanoate hydroxymethyltransferaseSked_15250
PANE
(NRULE_0117)
2-dehydropantoate 2-reductaseSked_06250
PANC
(NRULE_0118)
Pantothenate synthetaseSked_32010
Penicillin resistance(NFUNC_0047)
必須B
BLAD
(NRULE_0125)
Beta-lactamase class DSked_36830
Streptomycin resistance(NFUNC_0054)
必須C
APH6
(NRULE_0155)
Streptomycin 6-kinaseSked_35670
Trehalose biosynthesis (from maltooligosaccharide)(NFUNC_0037)
必須A
TREY
(NRULE_0140)
Maltooligosyl trehalose synthaseSked_16650
TREZ
(NRULE_0141)
Malto-oligosyltrehalose trehalohydrolaseSked_16640
任意 
GLGX
(NRULE_0139)
Glycogen debranching enzymeSked_10400 Sked_16660
Trehalose biosynthesis (from maltose)(NFUNC_0034)
必須B
TRES
(NRULE_0128)
Trehalose synthaseSked_10330
Trehalose biosynthesis (from NDP-glucose and glucose-6-phosphate)(NFUNC_0031)
必須A
TPS
(NRULE_0119)
Trehalose-phosphate synthaseSked_31700
TPP
(NRULE_0120)
Trehalose-6-phosphate phosphataseSked_31710
Uptake of osmoprotectant(NFUNC_0061)
必須C
BCCT
(NRULE_0220)
BCCT family transporterSked_18950 Sked_02380
E
OPUE
(NRULE_0222)
Sodium/proline symporterSked_05050

ゲノム配列情報

BioProject IDPRJNA19711
ローカスタグSKED
INSDC entriesCP001819
ステータスComplete
解析状況
コンティグ数1
サイズ(bp) 4,253,413
遺伝子数 3,710
フィニッシングゴール
アセンブル方法Newbler version 1.1.02.15, Phrap
冗長度
シーケンス方法
  • Sanger
  • 454
参考文献
  • Complete genome sequence of Sanguibacter keddieii type strain (ST-74). (Stand Genomic Sci. 2009) PMID: 21304646

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ゲノム塩基配列 CDS塩基配列 CDSアミノ酸変換配列 遺伝子/ORF リスト
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