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微生物 : Beutenbergia cavernae

微生物株情報

NBRC番号 16432
学名 Beutenbergia cavernae
別名(シノニム) 該当データなし
由来 IFO 16432 <- DSM 12333 <- Hans-Knoll Inst., Jena (I. Groth, HKI 0122) <- C. Weigel, 2163-026
他保存機関番号 ATCC BAA-8=CIP 106362=DSM 12333=JCM 11478
他株番号 HKI 0122
参考文献
10555355
Beutenbergia cavernae gen. nov., sp. nov., an L-lysine-containing actinomycete isolated from a cave. (Int J Syst Bacteriol. 1999)

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タイプパターン 構成遺伝子 該当CDS
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemaseBcav_3073
D-allose biosynthesis(NFUNC_0077)
必須A
LRHI
(NRULE_0242)
L-rhamnose isomeraseBcav_3624
Aminoglycoside resistance (by aminoglycoside N-acetyltransferase)(NFUNC_0041)
必須A
AAC3
(NRULE_0149)
Aminoglycoside N(3')-acetyltransferaseBcav_0391
Aminoglycoside resistance (by aminoglycoside O-phosphotransferase)(NFUNC_0043)
必須A
APH6
(NRULE_0155)
Streptomycin 6-kinaseBcav_2285 Bcav_3746 Bcav_2660
C
APH7
(NRULE_0157)
Hygromycin-B 7''-O-kinaseBcav_1948
Anthranilate biosynthesis(NFUNC_0038)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseBcav_0025
TRPE
(NRULE_0143)
Anthranilate synthase component IBcav_2227
Bacitracin resistance(NFUNC_0022)
必須A
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseBcav_2249
Beta-lactam antibiotic resistance(NFUNC_0033)
必須D
BLAD
(NRULE_0125)
Beta-lactamase class DBcav_0389
Hygromycin resistance(NFUNC_0055)
必須A
APH7
(NRULE_0157)
Hygromycin-B 7''-O-kinaseBcav_1948
Metal-binding protein(NFUNC_0105)
必須A
MOP
(NRULE_0322)
Putative molybdenum-binding proteinBcav_0785 Bcav_2554 Bcav_1233 Bcav_1230
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinBcav_1231 Bcav_2590
F
SOXR
(NRULE_0329)
Redox-sensitive transcriptional activator SoxRBcav_0738
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinBcav_1231 Bcav_2590
任意 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinBcav_1232
Penicillin resistance(NFUNC_0047)
必須B
BLAD
(NRULE_0125)
Beta-lactamase class DBcav_0389
Phenol degradation(NFUNC_0028)
必須B
PHEA1
(NRULE_0083)
Aromatic ring hydroxylaseBcav_0870
任意 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinBcav_1890 Bcav_0242 Bcav_2338
 
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseBcav_1125 Bcav_0871 Bcav_2298
Streptomycin resistance(NFUNC_0054)
必須C
APH6
(NRULE_0155)
Streptomycin 6-kinaseBcav_3746 Bcav_2285 Bcav_2660
Trehalose biosynthesis (from maltooligosaccharide)(NFUNC_0037)
必須A
TREY
(NRULE_0140)
Maltooligosyl trehalose synthaseBcav_1972
TREZ
(NRULE_0141)
Malto-oligosyltrehalose trehalohydrolaseBcav_1971
任意 
GLGX
(NRULE_0139)
Glycogen debranching enzymeBcav_1345 Bcav_1973
Trehalose biosynthesis (from maltose)(NFUNC_0034)
必須B
TRES
(NRULE_0128)
Trehalose synthaseBcav_1336
Trehalose biosynthesis (from NDP-glucose and glucose-6-phosphate)(NFUNC_0031)
必須A
TPS
(NRULE_0119)
Trehalose-phosphate synthaseBcav_0796
TPP
(NRULE_0120)
Trehalose-6-phosphate phosphataseBcav_0795
Uptake of osmoprotectant(NFUNC_0061)
必須C
BCCT
(NRULE_0220)
BCCT family transporterBcav_1121
Vitamin B6 biosynthesis (PdxS/PdxT pathway)(NFUNC_0059)
必須A
PDXS
(NRULE_0206)
Pyridoxal biosynthesis lyase PdxSBcav_1986
PDXT
(NRULE_0207)
Glutamine amidotransferase subunit PdxTBcav_1988

ゲノム配列情報

BioProject IDPRJNA20827
ローカスタグBCAV
INSDC entriesCP001618
ステータスComplete
解析状況
コンティグ数1
サイズ(bp) 4,669,183
遺伝子数 4,197
フィニッシングゴール
アセンブル方法
冗長度
シーケンス方法
参考文献
  • Complete genome sequence of Beutenbergia cavernae type strain (HKI 0122). (Stand Genomic Sci. 2009) PMID: 21304633

データダウンロード

ゲノム塩基配列 CDS塩基配列 CDSアミノ酸変換配列 遺伝子/ORF リスト
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