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Microbe : Chthoniobacter flavus

Microbe Description

NBRC No. Not assigned
Scientific name Chthoniobacter flavus
Synonymous name Not assigned
History
Other culture collection No.
Other No. Ellin428
Reference
21460085
Genome sequence of Chthoniobacter flavus Ellin428, an aerobic heterotrophic soil bacterium. (J Bacteriol. 2011)

Functional Potential >>Details

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TypePattern Component Gene CDS
Alanine racemization(NFUNC_0063)
RequireA
ALR
(NRULE_0228)
Alanine racemaseCfE428DRAFT_4525
Alginate degradation(NFUNC_0062)
RequireB
ALY
(NRULE_0227)
Alginate lyaseCfE428DRAFT_1594
Aminoglycoside resistance (by aminoglycoside N-acetyltransferase)(NFUNC_0041)
RequireB
AAC6
(NRULE_0150)
Aminoglycoside N(6')-acetyltransferaseCfE428DRAFT_6550
Aminoglycoside resistance (by aminoglycoside O-phosphotransferase)(NFUNC_0043)
RequireA
APH6
(NRULE_0155)
Streptomycin 6-kinaseCfE428DRAFT_4910
Anthranilate biosynthesis(NFUNC_0038)
RequireA
GLAT
(NRULE_0142)
Glutamine amidotransferaseCfE428DRAFT_0598
TRPE
(NRULE_0143)
Anthranilate synthase component ICfE428DRAFT_0599
Aromatic azo compounds degradation(NFUNC_0073)
RequireA
AZOR
(NRULE_0236)
FMN-dependent NADH-azoreductaseCfE428DRAFT_0360
Bacitracin resistance(NFUNC_0022)
RequireA
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseCfE428DRAFT_6252
Beta-lactam antibiotic resistance(NFUNC_0033)
RequireD
BLAD
(NRULE_0125)
Beta-lactamase class DCfE428DRAFT_3931
Metal-binding protein(NFUNC_0105)
RequireC
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinCfE428DRAFT_1997 CfE428DRAFT_5019 CfE428DRAFT_5745 CfE428DRAFT_0280
Molybdate transport (ABC transporter)(NFUNC_0097)
RequireA
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinCfE428DRAFT_0280 CfE428DRAFT_5745 CfE428DRAFT_5019 CfE428DRAFT_1997
(R)-pantothenate biosynthesis(NFUNC_0030)
RequireA
PAND
(NRULE_0115)
Aspartate 1-decarboxylaseCfE428DRAFT_1579
PANB
(NRULE_0116)
3-methyl-2-oxobutanoate hydroxymethyltransferaseCfE428DRAFT_0875
PANE
(NRULE_0117)
2-dehydropantoate 2-reductaseCfE428DRAFT_3880
PANC
(NRULE_0118)
Pantothenate synthetaseCfE428DRAFT_5928
Penicillin resistance(NFUNC_0047)
RequireB
BLAD
(NRULE_0125)
Beta-lactamase class DCfE428DRAFT_3931
Pyrroloquinoline quinone biosynthesis(NFUNC_0020)
RequireA
PQQC
(NRULE_0092)
Pyrroloquinoline-quinone synthaseCfE428DRAFT_2149
Participant 
PQQB
(NRULE_0091)
Coenzyme PQQ synthesis protein BCfE428DRAFT_2150
 
PQQE
(NRULE_0094)
Coenzyme PQQ synthesis protein ECfE428DRAFT_2147
Streptomycin resistance(NFUNC_0054)
RequireC
APH6
(NRULE_0155)
Streptomycin 6-kinaseCfE428DRAFT_4910
Trehalose biosynthesis (from maltooligosaccharide)(NFUNC_0037)
RequireA
TREY
(NRULE_0140)
Maltooligosyl trehalose synthaseCfE428DRAFT_1955
TREZ
(NRULE_0141)
Malto-oligosyltrehalose trehalohydrolaseCfE428DRAFT_3231 CfE428DRAFT_1956
Participant 
GLGX
(NRULE_0139)
Glycogen debranching enzymeCfE428DRAFT_1822 CfE428DRAFT_4836 CfE428DRAFT_6123 CfE428DRAFT_5239
Trehalose biosynthesis (from maltose)(NFUNC_0034)
RequireB
TRES
(NRULE_0128)
Trehalose synthaseCfE428DRAFT_1957

Genomic Overview

BioProject IDPRJNA28531
Locus_tagCFE428
INSDC entriesABVL00000000
Sequence statusWGS
Current status
Contig number62
Size(bp) 7,848,700
Gene 6,251
Finishing goal
Assembly method
Coverage
Technology
Reference

Data Download

Genomic nucleotide sequence Nucleotide sequence of the coding regions Translation of the coding sequneces List of genes / ORFs
FASTA
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FASTA
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FASTA
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TSV
uncompressed
2.3 MB 2.2 MB 1.4 MB 553.9 KB