| データID |
ANGE0000000003359
|
| データタイトル |
ゲノム（Bifidobacterium longum subsp. longum strain NBRC 114494 chromosome, complete genome）
|
| 生物種名 |
Bifidobacterium longum subsp. longum
|
| アクセッション番号またはID |
CP084020
|
| コメント |
Bifidobacterium longum subsp. longum strain NBRC 114494 chromosome, complete genome.
|
| ゲノム配列のバージョン |
CP084020.1
|
| 登録日または更新日 |
2021-10-07
|
| 配列取得用URL |
|
|
|
|
|
| 配列ファイルダウンロード |
|
| 配列長（bp）または配列数（rc） |
2526616
|
| 形態 |
circular
|
| BioProject |
|
| BioSample |
|
| 配列の種類 |
genomic DNA
|
| strain |
NBRC 114494
|
| 分離源 |
human feces
|
| plasmid |
|
| 備考 |
|
| 菌株へのコメント |
Bacteria and source DNA available from NBRC 114494.; The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/; ; ##Genome-Assembly-Data-START## ; Assembly Method :: Flye v. 2.8.3; Unicycler v. 0.4.7 ; Assembly Name :: Blong_114494 ; Genome Representation :: Full ; Expected Final Version :: Yes ; Genome Coverage :: 509.0x ; Sequencing Technology :: Illumina MiSeq; Oxford Nanopore GridION ; ##Genome-Assembly-Data-END##; ; ##Genome-Annotation-Data-START## ; Annotation Provider :: NCBI ; Annotation Date :: 09/23/2021 10:37:50 ; Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) ; Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ ; Annotation Software revision :: 5.3 ; Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region ; Genes (total) :: 2,207 ; CDSs (total) :: 2,134 ; Genes (coding) :: 2,084 ; CDSs (with protein) :: 2,084 ; Genes (RNA) :: 73 ; rRNAs :: 4, 4, 4 (5S, 16S, 23S) ; complete rRNAs :: 4, 4, 4 (5S, 16S, 23S) ; tRNAs :: 58 ; ncRNAs :: 3 ; Pseudo Genes (total) :: 50 ; CDSs (without protein) :: 50 ; Pseudo Genes (ambiguous residues) :: 0 of 50 ; Pseudo Genes (frameshifted) :: 16 of 50 ; Pseudo Genes (incomplete) :: 38 of 50 ; Pseudo Genes (internal stop) :: 4 of 50 ; Pseudo Genes (multiple problems) :: 7 of 50 ; CRISPR Arrays :: 1 ; ##Genome-Annotation-Data-END##
|
| 参照 |
1
|
| タイトル |
Characterization and demonstration of mock communities as control reagents for accurate human microbiome community measurements
|
| 雑誌名/登録機関名 |
Unpublished
|
| 出版年月 |
|
| 巻・号・ページ |
|
| 著者 |
Tourlousse,D.M. Narita,K. Miura,T. Furukawa,M. Shimamura,M. Sekiguchi,Y. Kawasaki,H.
|
| PubMed |
|
| 参照 |
2
|
| タイトル |
Direct Submission
|
| 雑誌名/登録機関名 |
Submitted (21-SEP-2021) Biomedical Research Institute, National Institute of Advanced Industrial Science and Technology, Biomedical Research Institute, AIST Tsukuba Central 6, 1-1-1 Higashi, Tsukuba, Ibaraki 305-8566, Japan
|
| 出版年月 |
|
| 巻・号・ページ |
|
| 著者 |
Tourlousse,D.M. Narita,K. Miura,T. Furukawa,M. Shimamura,M. Sekiguchi,Y. Kawasaki,H.
|
| PubMed |
|
