| データタイトル | 分類 | 菌株番号 | 基準株 | データID |
|---|
解析情報 ゲノム
| データID |
ANGE0000000004132
|
|---|---|
| データタイトル |
ゲノム（Corynebacterium parakroppenstedtii strain MC-26, whole genome shotgun sequencing project）
|
| 生物種名 |
Corynebacterium parakroppenstedtii
|
| アクセッション番号またはID |
JAGSOA000000000
|
| コメント |
Corynebacterium parakroppenstedtii strain MC-26, whole genome shotgun sequencing project.
|
| ゲノム配列のバージョン |
JAGSOA000000000.1
|
| 登録日または更新日 |
2021-08-25
|
| 配列取得用URL | |
| 配列ファイルダウンロード | |
| 配列長（bp）または配列数（rc） |
4
|
| 形態 |
linear
|
| BioProject | |
| BioSample | |
| 配列の種類 |
genomic DNA
|
| strain |
MC-26
|
| 分離源 |
breast specimens
|
| plasmid |
|
| 備考 |
|
| 菌株へのコメント |
The Corynebacterium parakroppenstedtii whole genome shotgun (WGS) project has the project accession JAGSOA000000000. This version of the project (01) has the accession number JAGSOA010000000, and consists of sequences JAGSOA010000001-JAGSOA010000004.; The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/; ##Genome-Assembly-Data-START## ; Assembly Method :: SOAPdenovo v. 2.04; SPAdes v. 1.2 ; Genome Representation :: Full ; Expected Final Version :: Yes ; Genome Coverage :: 286.0x ; Sequencing Technology :: Illumina NovaSeq ; ##Genome-Assembly-Data-END##; ##Genome-Annotation-Data-START## ; Annotation Provider :: NCBI ; Annotation Date :: 04/20/2021 11:59:27 ; Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) ; Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ ; Annotation Software revision :: 5.1 ; Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region ; Genes (total) :: 2,137 ; CDSs (total) :: 2,085 ; Genes (coding) :: 2,063 ; CDSs (with protein) :: 2,063 ; Genes (RNA) :: 52 ; rRNAs :: 1, 1, 1 (5S, 16S, 23S) ; complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) ; tRNAs :: 46 ; ncRNAs :: 3 ; Pseudo Genes (total) :: 22 ; CDSs (without protein) :: 22 ; Pseudo Genes (ambiguous residues) :: 0 of 22 ; Pseudo Genes (frameshifted) :: 10 of 22 ; Pseudo Genes (incomplete) :: 11 of 22 ; Pseudo Genes (internal stop) :: 3 of 22 ; Pseudo Genes (multiple problems) :: 2 of 22 ; ##Genome-Annotation-Data-END##
|
| 参照 |
1
|
| タイトル |
Identification and Characterization of Corynebacterium sp
|
| 雑誌名/登録機関名 |
Unpublished
|
| 出版年月 |
|
| 巻・号・ページ |
|
| 著者 |
Luo,Q. Chen,Q. Qu,P.
|
| PubMed |
|
| 参照 |
2
|
| タイトル |
Direct Submission
|
| 雑誌名/登録機関名 |
Submitted (20-APR-2021) Laboratory Medicine, The Second Clinical College, Guangzhou University of Chinese Medicine, 55 Inner Ring West Road, Guangzhou University Town, Guangzhou, Guangdong 510006, China
|
| 出版年月 |
|
| 巻・号・ページ |
|
| 著者 |
Luo,Q. Chen,Q. Qu,P.
|
| PubMed |
|
| 関連情報 |
このデータにリンクしている情報 |
