| データタイトル | 分類 | 菌株番号 | 基準株 | データID |
|---|
解析情報 ゲノム
| データID |
ANGE0000000004493
|
|---|---|
| データタイトル |
ゲノム（RefSeq:Cellulomonas palmilytica strain EW123 chromosome, complete genome）
|
| 生物種名 |
Cellulomonas palmilytica
|
| アクセッション番号またはID |
NZ_CP062221
|
| コメント |
Cellulomonas palmilytica strain EW123 chromosome, complete genome.
|
| ゲノム配列のバージョン |
NZ_CP062221.1
|
| 登録日または更新日 |
2022-01-27
|
| 配列取得用URL | |
| 配列ファイルダウンロード | |
| 配列長（bp）または配列数（rc） |
3834012
|
| 形態 |
circular
|
| BioProject | |
| BioSample | |
| 配列の種類 |
genomic DNA
|
| strain |
EW123
|
| 分離源 |
Earthworm bio-fertilizer soil
|
| plasmid |
|
| 備考 |
|
| 菌株へのコメント |
REFSEQ INFORMATION: The reference sequence is identical to CP062221.1.; The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/; Bacteria and source DNA available from Enzyme Technology Laboratory, Pilot Plant Development and Training Institute, King Mongkut's University of Technology Thonburi.; ##Genome-Assembly-Data-START## ; Assembly Date :: 19-MAY-2020 ; Assembly Method :: unicycler v. v0.4.8 ; Assembly Name :: EW123_hybrid ; Genome Representation :: Full ; Expected Final Version :: Yes ; Genome Coverage :: 10.0x ; Sequencing Technology :: Oxford Nanopore MinION; Illumina HiSeq ; ##Genome-Assembly-Data-END##; ##Genome-Annotation-Data-START## ; Annotation Provider :: NCBI RefSeq ; Annotation Date :: 10/29/2023 04:03:09 ; Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) ; Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ ; Annotation Software revision :: 6.6 ; Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA ; Genes (total) :: 3,462 ; CDSs (total) :: 3,408 ; Genes (coding) :: 3,394 ; CDSs (with protein) :: 3,394 ; Genes (RNA) :: 54 ; rRNAs :: 2, 2, 2 (5S, 16S, 23S) ; complete rRNAs :: 2, 2, 2 (5S, 16S, 23S) ; tRNAs :: 45 ; ncRNAs :: 3 ; Pseudo Genes (total) :: 14 ; CDSs (without protein) :: 14 ; Pseudo Genes (ambiguous residues) :: 0 of 14 ; Pseudo Genes (frameshifted) :: 1 of 14 ; Pseudo Genes (incomplete) :: 12 of 14 ; Pseudo Genes (internal stop) :: 1 of 14 ; ##Genome-Annotation-Data-END##; COMPLETENESS: full length.
|
| 参照 |
1
|
| タイトル |
Cellulomonas coenopalmateriei, sp. nov., a novel species of genus Cellulomonas for degradation of raw lignocellulose biomass; oil palm empty fruit bunch
|
| 雑誌名/登録機関名 |
Unpublished
|
| 出版年月 |
|
| 巻・号・ページ |
|
| 著者 |
Siriatcharanon,A.-k. Sutheeworapong,S. Pason,P. Waeonukul,R. Kosugi,A. Ratanakhanokchai,K. Tachaapaikoon,C.
|
| PubMed |
|
| 参照 |
2
|
| タイトル |
Direct Submission
|
| 雑誌名/登録機関名 |
Submitted (16-SEP-2020) Pilot Plant Development and Training Institute, King Mongkut's University of Technology Thonburi, Bangkuntien-Chaitalay, Bangkok 10150, Thailand
|
| 出版年月 |
|
| 巻・号・ページ |
|
| 著者 |
Siriatcharanon,A.-k. Sutheeworapong,S. Pason,P. Waeonukul,R. Kosugi,A. Ratanakhanokchai,K. Tachaapaikoon,C.
|
| PubMed |
|
| 関連情報 |
このデータにリンクしている情報 |
