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Microbe : Bacillus mycoides

Microbe Description

NBRC No. 101228
Scientific name Bacillus mycoides
Synonymous name Not assigned
History NRRL B-14799 <- DSM 2048 <- ATCC 6462 <- N.R. Smith, 273
Other culture collection No. ATCC 6462=CCUG 26678=CIP 103472=DSM 2048=HAMBI 1827=LMG 7128=NBRC 101227=NCTC 12974=NRRL B-14799=NRRL B-14811=NRRL NRS-273
Other No. 273
Reference
Not assigned

Functional Potential >>Details

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TypePattern Component Gene CDS
Alanine racemization(NFUNC_0063)
RequireA
ALR
(NRULE_0228)
Alanine racemasebmyco0001_18570 bmyco0001_2150 bmyco0001_55900
Aminoglycoside resistance (by aminoglycoside N-acetyltransferase)(NFUNC_0041)
RequireA
AAC3
(NRULE_0149)
Aminoglycoside N(3')-acetyltransferasebmyco0001_26270
Aminoglycoside resistance (by aminoglycoside O-nucleotidyltransferase)(NFUNC_0042)
RequireA
ANT6
(NRULE_0151)
Aminoglycoside 6-adenylyltransferasebmyco0001_17470
Aminoglycoside resistance (by aminoglycoside O-phosphotransferase)(NFUNC_0043)
RequireA
APH6
(NRULE_0155)
Streptomycin 6-kinasebmyco0001_30430
Ampicillin resistance(NFUNC_0046)
RequireA
BLAA
(NRULE_0122)
Beta-lactamase class Abmyco0001_23170 bmyco0001_7930 bmyco0001_22080
Anthranilate biosynthesis(NFUNC_0038)
RequireA
GLAT
(NRULE_0142)
Glutamine amidotransferasebmyco0001_10880 bmyco0001_570
TRPE
(NRULE_0143)
Anthranilate synthase component Ibmyco0001_560 bmyco0001_10870
Arginine degradation(NFUNC_0074)
RequireA
ARGI
(NRULE_0239)
Arginasebmyco0001_1380
Aromatic azo compounds degradation(NFUNC_0073)
RequireA
AZOR
(NRULE_0236)
FMN-dependent NADH-azoreductasebmyco0001_19650 bmyco0001_16910 bmyco0001_49750
B
AZR
(NRULE_0237)
NADPH azoreductasebmyco0001_19940
Arsenical resistance(NFUNC_0004)
RequireE
ARSB2
(NRULE_0016)
Arsenite resistance protein ArsBbmyco0001_28320
ARSC2
(NRULE_0018)
Arsenate reductasebmyco0001_28310
Participant 
ARSA
(NRULE_0014)
Arsenical pump-driving ATPasebmyco0001_2700
Bacitracin resistance(NFUNC_0022)
RequireA
UPPP
(NRULE_0097)
Undecaprenyl-diphosphatasebmyco0001_2370 bmyco0001_24100 bmyco0001_12410 bmyco0001_5780
Beta-lactam antibiotic resistance(NFUNC_0033)
RequireA
BLAA
(NRULE_0122)
Beta-lactamase class Abmyco0001_7930 bmyco0001_23170 bmyco0001_22080
Bioplastic synthesis(NFUNC_0001)
RequireC
PHAR
(NRULE_0013)
Poly(3-hydroxyalkanoate) polymerase PhaR subunitbmyco0001_11650
PHAC2
(NRULE_0373)
Poly(3-hydroxyalkanoate) polymerase PhaC subunitbmyco0001_11670
Participant 
PHAB
(NRULE_0011)
Acetoacetyl-CoA reductasebmyco0001_11660
 
PHAP2
(NRULE_0375)
Phasinbmyco0001_11630
Biotin biosynthesis(NFUNC_0051)
RequireA
BIOF
(NRULE_0182)
8-amino-7-oxononanoate synthasebmyco0001_37440
BIOA
(NRULE_0183)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferasebmyco0001_37460
BIOD
(NRULE_0184)
ATP-dependent dethiobiotin synthetase BioDbmyco0001_37450
BIOB
(NRULE_0185)
Biotin synthasebmyco0001_37410
Chloramphenicol resistance(NFUNC_0025)
RequireA
CAT1
(NRULE_0107)
Chloramphenicol acetyltransferasebmyco0001_21130
Fosfomycin resistance(NFUNC_0023)
RequireB
FOSB
(NRULE_0099)
Metallothiol transferase FosBbmyco0001_18180
GABA biosynthesis(NFUNC_0066)
RequireA
GAD
(NRULE_0231)
Glutamate decarboxylasebmyco0001_8500
Macrolide antibiotic resistance(NFUNC_0045)
RequireD
ERE
(NRULE_0168)
Erythromycin esterasebmyco0001_56490 bmyco0001_28710
Metal-binding protein(NFUNC_0105)
RequireA
MOP
(NRULE_0322)
Putative molybdenum-binding proteinbmyco0001_36390 bmyco0001_9570
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinbmyco0001_1740 bmyco0001_15320
D
MNTR
(NRULE_0327)
DtxR family transcriptional regulator MntRbmyco0001_38340
Molybdate transport (ABC transporter)(NFUNC_0097)
RequireA
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinbmyco0001_1740 bmyco0001_15320
Participant 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinbmyco0001_1730
(R)-pantothenate biosynthesis(NFUNC_0030)
RequireA
PAND
(NRULE_0115)
Aspartate 1-decarboxylasebmyco0001_14040
PANB
(NRULE_0116)
3-methyl-2-oxobutanoate hydroxymethyltransferasebmyco0001_14020
PANE
(NRULE_0117)
2-dehydropantoate 2-reductasebmyco0001_16580 bmyco0001_35440
PANC
(NRULE_0118)
Pantothenate synthetasebmyco0001_14030
Penicillin resistance(NFUNC_0047)
RequireA
BLAA
(NRULE_0122)
Beta-lactamase class Abmyco0001_7930 bmyco0001_22080 bmyco0001_23170
Riboflavin biosynthesis(NFUNC_0058)
RequireA
RIBB
(NRULE_0200)
3,4-dihydroxy-2-butanone 4-phosphate synthasebmyco0001_37380
RIBA
(NRULE_0201)
GTP cyclohydrolase-2bmyco0001_37380
RIBD
(NRULE_0202)
Riboflavin biosynthesis protein RibDbmyco0001_37360
RIBH
(NRULE_0203)
6,7-dimethyl-8-ribityllumazine synthasebmyco0001_37390
RIBE
(NRULE_0204)
Riboflavin synthasebmyco0001_37370
Participant 
RIBF
(NRULE_0205)
Riboflavin biosynthesis protein RibFbmyco0001_34300
Streptogramin resistance(NFUNC_0027)
RequireB
VGB
(NRULE_0114)
Virginiamycin B lyasebmyco0001_16690
Streptomycin resistance(NFUNC_0054)
RequireA
ANT6
(NRULE_0151)
Aminoglycoside 6-adenylyltransferasebmyco0001_17470
C
APH6
(NRULE_0155)
Streptomycin 6-kinasebmyco0001_30430
Uptake of osmoprotectant(NFUNC_0061)
RequireC
BCCT
(NRULE_0220)
BCCT family transporterbmyco0001_48090
E
OPUE
(NRULE_0222)
Sodium/proline symporterbmyco0001_10860
Vitamin B6 biosynthesis (PdxS/PdxT pathway)(NFUNC_0059)
RequireA
PDXS
(NRULE_0206)
Pyridoxal biosynthesis lyase PdxSbmyco0001_40
PDXT
(NRULE_0207)
Glutamine amidotransferase subunit PdxTbmyco0001_50

Genomic Overview

BioProject IDPRJNA29701
Locus_tag
INSDC entriesACMU01000000
Sequence statusWGS
Current status
Contig number200
Size(bp) 5,541,906
Gene 5,658
Finishing goal
Assembly method
Coverage8.1X
Technology
Reference
  • Genomic characterization of the Bacillus cereus sensu lato species: backdrop to the evolution of Bacillus anthracis. (Genome Res. 2012) PMID: 22645259

Data Download

Genomic nucleotide sequence Nucleotide sequence of the coding regions Translation of the coding sequneces List of genes / ORFs
FASTA
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FASTA
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FASTA
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TSV
uncompressed
1.6 MB 1.4 MB 958.0 KB 444.3 KB