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Microbe : Acaryochloris marina

Microbe Description

NBRC No. 102967
Scientific name Acaryochloris marina
Synonymous name Not assigned
History MBIC11017
Other culture collection No. MBIC 11017
Other No. Acaryo
Reference
9789086
A photosystem I reaction center driven by chlorophyll d in oxygenic photosynthesis. (Proc Natl Acad Sci U S A. 1998)
10354492
Fluorescence properties of chlorophyll d-dominating prokaryotic alga, acaryochloris marina: studies using time-resolved fluorescence spectroscopy on intact cells (Biochim Biophys Acta. 1999)
10482787
Molecular structure, localization and function of biliproteins in the chlorophyll a/d containing oxygenic photosynthetic prokaryote Acaryochloris marina. (Biochim Biophys Acta. 1999)
10611453
Uphill energy transfer in a chlorophyll d-dominating oxygenic photosynthetic prokaryote, Acaryochloris marina. (Biochim Biophys Acta. 2000)
15016990
Chlorophyll d in an epiphytic cyanobacterium of red algae. (Science. 2004)
16228493
Functional characteristics of chlorophyll d-predominating photosynthetic apparatus in intact cells of Acaryochloris marina. (Photosynth Res. 2000)

Functional Potential >>Details

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TypePattern Component Gene CDS
Alanine racemization(NFUNC_0063)
RequireA
ALR
(NRULE_0228)
Alanine racemaseAM1_0858
Aminoglycoside resistance (by aminoglycoside N-acetyltransferase)(NFUNC_0041)
RequireA
AAC3
(NRULE_0149)
Aminoglycoside N(3')-acetyltransferaseAM1_3129 AM1_B0404 AM1_A0084 AM1_3620
Anthranilate biosynthesis(NFUNC_0038)
RequireA
GLAT
(NRULE_0142)
Glutamine amidotransferaseAM1_1430
TRPE
(NRULE_0143)
Anthranilate synthase component IAM1_5143
Aromatic azo compounds degradation(NFUNC_0073)
RequireA
AZOR
(NRULE_0236)
FMN-dependent NADH-azoreductaseAM1_4919
Arsenical resistance(NFUNC_0004)
RequireF
ARSB2
(NRULE_0016)
Arsenite resistance protein ArsBAM1_0595
ARSC3
(NRULE_0019)
Arsenate reductaseAM1_0594
Participant 
ARSA
(NRULE_0014)
Arsenical pump-driving ATPaseAM1_5631
 
ARSH
(NRULE_0021)
ArsH proteinAM1_5930
Bacitracin resistance(NFUNC_0022)
RequireA
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseAM1_1064
Beta-lactam antibiotic resistance(NFUNC_0033)
RequireD
BLAD
(NRULE_0125)
Beta-lactamase class DAM1_4306 AM1_3437
Metal-binding protein(NFUNC_0105)
RequireC
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinAM1_2039 AM1_0071 AM1_0773
Molybdate transport (ABC transporter)(NFUNC_0097)
RequireA
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinAM1_0071 AM1_0773 AM1_2039
Participant 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinAM1_0772
Nitrile hydratase(NFUNC_0002)
RequireA
NHAA
(NRULE_0001)
Nitrile hydratase subunit alphaAM1_1194
NHAB
(NRULE_0002)
Nitrile hydratase subunit betaAM1_1195
Participant 
P14K
(NRULE_0006)
Nitrile hydratase activator P14KAM1_1193
 
COBW
(NRULE_0007)
CobW/P47K family proteinAM1_3057 AM1_F0072 AM1_F0053 AM1_B0157 AM1_B0146 AM1_B0112 AM1_5964 AM1_5801 AM1_3070 AM1_3031 AM1_3014 AM1_1196
Penicillin resistance(NFUNC_0047)
RequireB
BLAD
(NRULE_0125)
Beta-lactamase class DAM1_4306 AM1_3437
Riboflavin biosynthesis(NFUNC_0058)
RequireA
RIBB
(NRULE_0200)
3,4-dihydroxy-2-butanone 4-phosphate synthaseAM1_0608
RIBA
(NRULE_0201)
GTP cyclohydrolase-2AM1_0608
RIBD
(NRULE_0202)
Riboflavin biosynthesis protein RibDAM1_3853
RIBH
(NRULE_0203)
6,7-dimethyl-8-ribityllumazine synthaseAM1_1010
RIBE
(NRULE_0204)
Riboflavin synthaseAM1_1983
Participant 
RIBF
(NRULE_0205)
Riboflavin biosynthesis protein RibFAM1_2652
Streptogramin resistance(NFUNC_0027)
RequireA
VAT
(NRULE_0113)
Streptogramin A acetyltransferaseAM1_5174

Genomic Overview

BioProject IDPRJNA12997
Locus_tag
INSDC entriesCP000828
Sequence statusComplete
Current status
Contig number10
Size(bp) 8,361,599
Gene 8,383
Finishing goal
Assembly method
Coverage
Technology
Reference
  • Niche adaptation and genome expansion in the chlorophyll d-producing cyanobacterium Acaryochloris marina. (Proc Natl Acad Sci U S A. 2008) PMID: 18252824

Data Download

Genomic nucleotide sequence Nucleotide sequence of the coding regions Translation of the coding sequneces List of genes / ORFs
FASTA
gz
FASTA
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FASTA
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TSV
uncompressed
2.5 MB 2.1 MB 1.4 MB 620.7 KB