Microbe : Acaryochloris marina

Microbe Description

NBRC No.	102967
Scientific name	Acaryochloris marina
Synonymous name	Not assigned
History	MBIC11017
Other culture collection No.	MBIC 11017
Other No.	Acaryo
Reference	9789086 A photosystem I reaction center driven by chlorophyll d in oxygenic photosynthesis. (Proc Natl Acad Sci U S A. 1998) 10354492 Fluorescence properties of chlorophyll d-dominating prokaryotic alga, acaryochloris marina: studies using time-resolved fluorescence spectroscopy on intact cells (Biochim Biophys Acta. 1999) 10482787 Molecular structure, localization and function of biliproteins in the chlorophyll a/d containing oxygenic photosynthetic prokaryote Acaryochloris marina. (Biochim Biophys Acta. 1999) 10611453 Uphill energy transfer in a chlorophyll d-dominating oxygenic photosynthetic prokaryote, Acaryochloris marina. (Biochim Biophys Acta. 2000) 15016990 Chlorophyll d in an epiphytic cyanobacterium of red algae. (Science. 2004) 16228493 Functional characteristics of chlorophyll d-predominating photosynthetic apparatus in intact cells of Acaryochloris marina. (Photosynth Res. 2000)

Functional Potential >>Details


Type	Pattern	Component Gene		CDS
Alanine racemization(NFUNC_0063)
Require	A	ALR (NRULE_0228)	Alanine racemase	AM1_0858
Aminoglycoside resistance (by aminoglycoside N-acetyltransferase)(NFUNC_0041)
Require	A	AAC3 (NRULE_0149)	Aminoglycoside N(3')-acetyltransferase	AM1_3129 AM1_B0404 AM1_A0084 AM1_3620
Anthranilate biosynthesis(NFUNC_0038)
Require	A	GLAT (NRULE_0142)	Glutamine amidotransferase	AM1_1430
Require	A	TRPE (NRULE_0143)	Anthranilate synthase component I	AM1_5143
Aromatic azo compounds degradation(NFUNC_0073)
Require	A	AZOR (NRULE_0236)	FMN-dependent NADH-azoreductase	AM1_4919
Arsenical resistance(NFUNC_0004)
Require	F	ARSB2 (NRULE_0016)	Arsenite resistance protein ArsB	AM1_0595
Require	F	ARSC3 (NRULE_0019)	Arsenate reductase	AM1_0594
Participant		ARSA (NRULE_0014)	Arsenical pump-driving ATPase	AM1_5631
Participant		ARSH (NRULE_0021)	ArsH protein	AM1_5930
Bacitracin resistance(NFUNC_0022)
Require	A	UPPP (NRULE_0097)	Undecaprenyl-diphosphatase	AM1_1064
Beta-lactam antibiotic resistance(NFUNC_0033)
Require	D	BLAD (NRULE_0125)	Beta-lactamase class D	AM1_4306 AM1_3437
Metal-binding protein(NFUNC_0105)
Require	C	MODA (NRULE_0324)	Molybdate ABC transporter substrate-binding protein	AM1_2039 AM1_0071 AM1_0773
Molybdate transport (ABC transporter)(NFUNC_0097)
Require	A	MODA (NRULE_0324)	Molybdate ABC transporter substrate-binding protein	AM1_0071 AM1_0773 AM1_2039
Participant		MODB (NRULE_0325)	Molybdate ABC transporter permease protein	AM1_0772
Nitrile hydratase(NFUNC_0002)
Require	A	NHAA (NRULE_0001)	Nitrile hydratase subunit alpha	AM1_1194
Require	A	NHAB (NRULE_0002)	Nitrile hydratase subunit beta	AM1_1195
Participant		P14K (NRULE_0006)	Nitrile hydratase activator P14K	AM1_1193
Participant		COBW (NRULE_0007)	CobW/P47K family protein	AM1_3057 AM1_F0072 AM1_F0053 AM1_B0157 AM1_B0146 AM1_B0112 AM1_5964 AM1_5801 AM1_3070 AM1_3031 AM1_3014 AM1_1196
Penicillin resistance(NFUNC_0047)
Require	B	BLAD (NRULE_0125)	Beta-lactamase class D	AM1_4306 AM1_3437
Riboflavin biosynthesis(NFUNC_0058)
Require	A	RIBB (NRULE_0200)	3,4-dihydroxy-2-butanone 4-phosphate synthase	AM1_0608
		RIBA (NRULE_0201)	GTP cyclohydrolase-2	AM1_0608
		RIBD (NRULE_0202)	Riboflavin biosynthesis protein RibD	AM1_3853
		RIBH (NRULE_0203)	6,7-dimethyl-8-ribityllumazine synthase	AM1_1010
		RIBE (NRULE_0204)	Riboflavin synthase	AM1_1983
Participant		RIBF (NRULE_0205)	Riboflavin biosynthesis protein RibF	AM1_2652
Streptogramin resistance(NFUNC_0027)
Require	A	VAT (NRULE_0113)	Streptogramin A acetyltransferase	AM1_5174

Genomic Overview

BioProject ID	PRJNA12997
Locus_tag
INSDC entries	CP000828
Sequence status	Complete
Current status
Contig number	10
Size(bp)	8,361,599
Gene	8,383
Finishing goal
Assembly method
Coverage
Technology

Reference

Niche adaptation and genome expansion in the chlorophyll d-producing cyanobacterium Acaryochloris marina. (Proc Natl Acad Sci U S A. 2008) PMID: 18252824

Data Download

Genomic nucleotide sequence	Nucleotide sequence of the coding regions	Translation of the coding sequneces	List of genes / ORFs
FASTA gz	FASTA gz	FASTA gz	TSV uncompressed

2.5 MB	2.1 MB	1.4 MB	620.7 KB