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微生物 : Nakamurella multipartita

微生物株情報

NBRC番号 105858
学名 Nakamurella multipartita
別名(シノニム) Microsphaera multipartita
由来 JCM 9543 <- K. Nakamura, Y-104
他保存機関番号 ATCC 700099=CCM 4621=CIP 104796=DSM 44233=FERM P-14709=JCM 9543=KACC 20258
他株番号 Y-104
参考文献
15143055
Proposal of Nakamurella gen. nov. as a substitute for the bacterial genus Microsphaera Yoshimi et al. 1996 and Nakamurellaceae fam. nov. as a substitute for the illegitimate bacterial family Microsphaeraceae Rainey et al. 1997. (Int J Syst Evol Microbiol. 2004)

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タイプパターン 構成遺伝子 該当CDS
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemaseNamu_1190
Aminoglycoside resistance (by aminoglycoside N-acetyltransferase)(NFUNC_0041)
必須A
AAC3
(NRULE_0149)
Aminoglycoside N(3')-acetyltransferaseNamu_0547
Anthranilate biosynthesis(NFUNC_0038)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseNamu_0075
TRPE
(NRULE_0143)
Anthranilate synthase component INamu_3078
Aromatic azo compounds degradation(NFUNC_0073)
必須A
AZOR
(NRULE_0236)
FMN-dependent NADH-azoreductaseNamu_1846
Bacitracin resistance(NFUNC_0022)
必須A
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseNamu_2775
Bioplastic degradation(NFUNC_0015)
必須B
PHAZ2
(NRULE_0080)
Poly(3-hydroxyalkanoate) depolymeraseNamu_1984 Namu_1990 Namu_2820 Namu_0493 Namu_0209
Bioplastic synthesis(NFUNC_0001)
必須A
PHAC1
(NRULE_0010)
Poly(3-hydroxyalkanoate) polymeraseNamu_4877
GABA biosynthesis(NFUNC_0066)
必須A
GAD
(NRULE_0231)
Glutamate decarboxylaseNamu_5339
Macrolide antibiotic resistance(NFUNC_0045)
必須B
RLMA
(NRULE_0165)
23S rRNA (guanine-N(1))-methyltransferaseNamu_0717
Metal-binding protein(NFUNC_0105)
必須A
MOP
(NRULE_0322)
Putative molybdenum-binding proteinNamu_4920 Namu_2907 Namu_2904
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinNamu_1664 Namu_2906 Namu_4001
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinNamu_2906 Namu_4001 Namu_1664
任意 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinNamu_2905
(R)-pantothenate biosynthesis(NFUNC_0030)
必須A
PAND
(NRULE_0115)
Aspartate 1-decarboxylaseNamu_4391
PANB
(NRULE_0116)
3-methyl-2-oxobutanoate hydroxymethyltransferaseNamu_2317
PANE
(NRULE_0117)
2-dehydropantoate 2-reductaseNamu_1107
PANC
(NRULE_0118)
Pantothenate synthetaseNamu_2314
Phenol degradation(NFUNC_0028)
必須C
PHEA2
(NRULE_0084)
Aromatic ring hydroxylaseNamu_0227
任意 
FDR2
(NRULE_0057)
Ferredoxin reductaseNamu_0741
 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentNamu_2412 Namu_2487
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinNamu_2246 Namu_4687 Namu_3250 Namu_0747
 
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseNamu_5120
Riboflavin biosynthesis(NFUNC_0058)
必須A
RIBB
(NRULE_0200)
3,4-dihydroxy-2-butanone 4-phosphate synthaseNamu_4151
RIBA
(NRULE_0201)
GTP cyclohydrolase-2Namu_4151
RIBD
(NRULE_0202)
Riboflavin biosynthesis protein RibDNamu_0753
RIBH
(NRULE_0203)
6,7-dimethyl-8-ribityllumazine synthaseNamu_4150
RIBE
(NRULE_0204)
Riboflavin synthaseNamu_4152
任意 
RIBF
(NRULE_0205)
Riboflavin biosynthesis protein RibFNamu_2214
Trehalose biosynthesis (from maltooligosaccharide)(NFUNC_0037)
必須A
TREY
(NRULE_0140)
Maltooligosyl trehalose synthaseNamu_2794
TREZ
(NRULE_0141)
Malto-oligosyltrehalose trehalohydrolaseNamu_2793
任意 
GLGX
(NRULE_0139)
Glycogen debranching enzymeNamu_3089 Namu_2795
Trehalose biosynthesis (from maltose)(NFUNC_0034)
必須B
TRES
(NRULE_0128)
Trehalose synthaseNamu_3091
Trehalose biosynthesis (from NDP-glucose and glucose-6-phosphate)(NFUNC_0031)
必須A
TPS
(NRULE_0119)
Trehalose-phosphate synthaseNamu_4915
TPP
(NRULE_0120)
Trehalose-6-phosphate phosphataseNamu_4915
Vitamin B6 biosynthesis (PdxS/PdxT pathway)(NFUNC_0059)
必須A
PDXS
(NRULE_0206)
Pyridoxal biosynthesis lyase PdxSNamu_3415
PDXT
(NRULE_0207)
Glutamine amidotransferase subunit PdxTNamu_3399

ゲノム配列情報

BioProject IDPRJNA29537
ローカスタグNAMU
INSDC entriesCP001737
ステータスComplete
解析状況
コンティグ数1
サイズ(bp) 6,060,298
遺伝子数 5,240
フィニッシングゴール
アセンブル方法
冗長度
シーケンス方法
参考文献
  • Complete genome sequence of Nakamurella multipartita type strain (Y-104). (Stand Genomic Sci. 2010) PMID: 21304699

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ゲノム塩基配列 CDS塩基配列 CDSアミノ酸変換配列 遺伝子/ORF リスト
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