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微生物 : Bacillus pumilus

微生物株情報

NBRC番号 12092
学名 Bacillus pumilus
別名(シノニム) 該当データなし
由来 IFO 12092 <- NCIB 9369 <- ATCC 7061 <- N.R. Smith, 272 <- F. Lohnis <- Kral Collection <- O. Gottheil
他保存機関番号 ATCC 7061=BCRC 11706=CCM 2144=CCUG 26015=CCUG 26016=CIP 52.67=DSM 27=HAMBI 1826=IAM 12469=JCM 2508=LMG 18928=LMG 7132=NCCB 48024=NCIB 9369=NCIMB 9369=NCTC 10337=NRIC 1010=NRRL NRS-272=VKM B-508
他株番号 272
参考文献
該当データなし

推定保有機能 >>詳細

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タイプパターン 構成遺伝子 該当CDS
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemaseBAT_3641 BAT_2905
Aminoglycoside resistance (by aminoglycoside N-acetyltransferase)(NFUNC_0041)
必須A
AAC3
(NRULE_0149)
Aminoglycoside N(3')-acetyltransferaseBAT_3776
Anthranilate biosynthesis(NFUNC_0038)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseBAT_4074
TRPE
(NRULE_0143)
Anthranilate synthase component IBAT_2019
Arginine degradation(NFUNC_0074)
必須A
ARGI
(NRULE_0239)
ArginaseBAT_3970
Aromatic azo compounds degradation(NFUNC_0073)
必須A
AZOR
(NRULE_0236)
FMN-dependent NADH-azoreductaseBAT_0365 BAT_3700
Bacitracin resistance(NFUNC_0022)
必須A
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseBAT_0219
Betaine biosynthesis (from choline)(NFUNC_0049)
必須B
GBSB
(NRULE_0176)
Alcohol dehydrogenaseBAT_0010
BETB
(NRULE_0177)
Betaine aldehyde dehydrogenaseBAT_0011
Chloramphenicol resistance(NFUNC_0025)
必須A
CAT1
(NRULE_0107)
Chloramphenicol acetyltransferaseBAT_2929
Macrolide antibiotic resistance(NFUNC_0045)
必須E
MPH
(NRULE_0169)
Macrolide 2'-phosphotransferaseBAT_2923
Metal-binding protein(NFUNC_0105)
必須A
MOP
(NRULE_0322)
Putative molybdenum-binding proteinBAT_3148
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinBAT_0434 BAT_2274
D
MNTR
(NRULE_0327)
DtxR family transcriptional regulator MntRBAT_1830
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinBAT_0434 BAT_2274
任意 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinBAT_0435
(R)-pantothenate biosynthesis(NFUNC_0030)
必須A
PAND
(NRULE_0115)
Aspartate 1-decarboxylaseBAT_2047
PANB
(NRULE_0116)
3-methyl-2-oxobutanoate hydroxymethyltransferaseBAT_2045
PANE
(NRULE_0117)
2-dehydropantoate 2-reductaseBAT_2638
PANC
(NRULE_0118)
Pantothenate synthetaseBAT_2046
Riboflavin biosynthesis(NFUNC_0058)
必須A
RIBB
(NRULE_0200)
3,4-dihydroxy-2-butanone 4-phosphate synthaseBAT_1958
RIBA
(NRULE_0201)
GTP cyclohydrolase-2BAT_3398 BAT_0977
RIBD
(NRULE_0202)
Riboflavin biosynthesis protein RibDBAT_3394 BAT_0978
RIBH
(NRULE_0203)
6,7-dimethyl-8-ribityllumazine synthaseBAT_1959
RIBE
(NRULE_0204)
Riboflavin synthaseBAT_1957
任意 
RIBF
(NRULE_0205)
Riboflavin biosynthesis protein RibFBAT_2456
Uptake of osmoprotectant(NFUNC_0061)
必須A
OPUAC
(NRULE_0213)
Osmoprotectant ABC transporter substrate-binding proteinBAT_0479 BAT_3837
OPUAB
(NRULE_0214)
Osmoprotectant ABC transporter permease proteinBAT_0480 BAT_3838 BAT_0478
OPUAA
(NRULE_0215)
Osmoprotectant ABC transporter ATP-binding proteinBAT_1171 BAT_0481 BAT_3839
C
BCCT
(NRULE_0220)
BCCT family transporterBAT_1272
E
OPUE
(NRULE_0222)
Sodium/proline symporterBAT_3449
Vitamin B6 biosynthesis (PdxS/PdxT pathway)(NFUNC_0059)
必須A
PDXS
(NRULE_0206)
Pyridoxal biosynthesis lyase PdxSBAT_4147
PDXT
(NRULE_0207)
Glutamine amidotransferase subunit PdxTBAT_4146

ゲノム配列情報

BioProject IDPRJNA29785
ローカスタグ
INSDC entriesABRX00000000
ステータスWGS
解析状況
コンティグ数16
サイズ(bp) 3,833,998
遺伝子数 3,900
フィニッシングゴール
アセンブル方法
冗長度
シーケンス方法
参考文献

データダウンロード

ゲノム塩基配列 CDS塩基配列 CDSアミノ酸変換配列 遺伝子/ORF リスト
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