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微生物 : Bacillus subtilis subsp. subtilis

微生物株情報

NBRC番号 13719
学名 Bacillus subtilis subsp. subtilis
別名(シノニム) Bacillus subtilis
由来 IFO 13719 <- ATCC 6051 <- H.J. Conn, strain Marburg
他保存機関番号 ATCC 6051=ATCC 6051-U=BCRC 10255=CCM 2216=CCRC 10255=CCUG 163B=CFBP 4228=CIP 52.65=DSM 10=IAM 12118=JCM 1465=LMG 7135=NBRC 16412=NCCB 32009=NCCB 53016=NCCB 70064=NCIB 3610=NCIMB 3610=NCTC 3610=NRRL B-4219=NRRL NRS-1315=NRRL NRS-744=VKM B-501
他株番号 1315=744=Marburg=IMET 10758
参考文献
8863428
A polyphasic reassessment of the genus Paenibacillus, reclassification of Bacillus lautus (Nakamura 1984) as Paenibacillus lautus comb. nov. and of Bacillus peoriae (Montefusco et al. 1993) as Paenibacillus peoriae comb. nov., and emended descriptions of P. lautus and of P. peoriae. (Int J Syst Bacteriol. 1996)
10425781
Relationship of Bacillus subtilis clades associated with strains 168 and W23: a proposal for Bacillus subtilis subsp. subtilis subsp. nov. and Bacillus subtilis subsp. spizizenii subsp. nov. (Int J Syst Bacteriol. 1999)
14663088
Gradual evolution in bacteria: evidence from Bacillus systematics. (Microbiology (Reading). 2003)

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タイプパターン 構成遺伝子 該当CDS
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemaseBSU04640 BSU17640
Aminoglycoside resistance (by aminoglycoside N-acetyltransferase)(NFUNC_0041)
必須A
AAC3
(NRULE_0149)
Aminoglycoside N(3')-acetyltransferaseBSU21630
Aminoglycoside resistance (by aminoglycoside O-nucleotidyltransferase)(NFUNC_0042)
必須A
ANT6
(NRULE_0151)
Aminoglycoside 6-adenylyltransferaseBSU26790
Ampicillin resistance(NFUNC_0046)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class ABSU18800
任意 
BLAD
(NRULE_0125)
Beta-lactamase class DBSU02090
Anthranilate biosynthesis(NFUNC_0038)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseBSU00750
TRPE
(NRULE_0143)
Anthranilate synthase component IBSU22680
Arginine degradation(NFUNC_0074)
必須A
ARGI
(NRULE_0239)
ArginaseBSU40320
Aromatic azo compounds degradation(NFUNC_0073)
必須A
AZOR
(NRULE_0236)
FMN-dependent NADH-azoreductaseBSU33540 BSU19230
B
AZR
(NRULE_0237)
NADPH azoreductaseBSU09340
Arsenical resistance(NFUNC_0004)
必須B
ARSB1
(NRULE_0015)
Arsenical pump membrane proteinBSU05340
ARSC2
(NRULE_0018)
Arsenate reductaseBSU25780
E
ARSB2
(NRULE_0016)
Arsenite resistance protein ArsBBSU25790
ARSC2
(NRULE_0018)
Arsenate reductaseBSU25780
Bacitracin resistance(NFUNC_0022)
必須A
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseBSU31150
Beta-lactam antibiotic resistance(NFUNC_0033)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class ABSU18800
D
BLAD
(NRULE_0125)
Beta-lactamase class DBSU02090
Betaine biosynthesis (from choline)(NFUNC_0049)
必須B
GBSB
(NRULE_0176)
Alcohol dehydrogenaseBSU31050
BETB
(NRULE_0177)
Betaine aldehyde dehydrogenaseBSU31060
Biotin biosynthesis(NFUNC_0051)
必須A
BIOF
(NRULE_0182)
8-amino-7-oxononanoate synthaseBSU30220 BSU17000
BIOA
(NRULE_0183)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferaseBSU30230
BIOD
(NRULE_0184)
ATP-dependent dethiobiotin synthetase BioDBSU30210
BIOB
(NRULE_0185)
Biotin synthaseBSU30200
Fosfomycin resistance(NFUNC_0023)
必須B
FOSB
(NRULE_0099)
Metallothiol transferase FosBBSU17840
Macrolide antibiotic resistance(NFUNC_0045)
必須B
RLMA
(NRULE_0165)
23S rRNA (guanine-N(1))-methyltransferaseBSU39010
D
ERE
(NRULE_0168)
Erythromycin esteraseBSU02310
E
MPH
(NRULE_0169)
Macrolide 2'-phosphotransferaseBSU02520
Metal-binding protein(NFUNC_0105)
必須A
MOP
(NRULE_0322)
Putative molybdenum-binding proteinBSU32550 BSU38810
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinBSU33380
D
MNTR
(NRULE_0327)
DtxR family transcriptional regulator MntRBSU24520
Milk clotting(NFUNC_0072)
必須A
MCP
(NRULE_0235)
Milk-clotting proteaseBSU14700
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinBSU33380
任意 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinBSU33390
(R)-pantothenate biosynthesis(NFUNC_0030)
必須A
PAND
(NRULE_0115)
Aspartate 1-decarboxylaseBSU22410
PANB
(NRULE_0116)
3-methyl-2-oxobutanoate hydroxymethyltransferaseBSU22430
PANE
(NRULE_0117)
2-dehydropantoate 2-reductaseBSU15110 BSU14440
PANC
(NRULE_0118)
Pantothenate synthetaseBSU22420
Penicillin resistance(NFUNC_0047)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class ABSU18800
B
BLAD
(NRULE_0125)
Beta-lactamase class DBSU02090
Phenol degradation(NFUNC_0028)
必須B
PHEA1
(NRULE_0083)
Aromatic ring hydroxylaseBSU18620
任意 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinBSU10390 BSU03290 BSU22560
 
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseBSU36080 BSU05380
Phytic acid hydrolysis(NFUNC_0085)
必須A
PHYT
(NRULE_0258)
3-phytaseBSU19800
Riboflavin biosynthesis(NFUNC_0058)
必須A
RIBB
(NRULE_0200)
3,4-dihydroxy-2-butanone 4-phosphate synthaseBSU23260
RIBA
(NRULE_0201)
GTP cyclohydrolase-2BSU23260
RIBD
(NRULE_0202)
Riboflavin biosynthesis protein RibDBSU23280
RIBH
(NRULE_0203)
6,7-dimethyl-8-ribityllumazine synthaseBSU23250
RIBE
(NRULE_0204)
Riboflavin synthaseBSU23270
任意 
RIBF
(NRULE_0205)
Riboflavin biosynthesis protein RibFBSU16670
Streptomycin resistance(NFUNC_0054)
必須A
ANT6
(NRULE_0151)
Aminoglycoside 6-adenylyltransferaseBSU26790
Uptake of osmoprotectant(NFUNC_0061)
必須A
OPUAC
(NRULE_0213)
Osmoprotectant ABC transporter substrate-binding proteinBSU03000 BSU33710 BSU33810
OPUAB
(NRULE_0214)
Osmoprotectant ABC transporter permease proteinBSU02990 BSU33720 BSU33800 BSU33820 BSU33700
OPUAA
(NRULE_0215)
Osmoprotectant ABC transporter ATP-binding proteinBSU33830 BSU02980 BSU33730
C
BCCT
(NRULE_0220)
BCCT family transporterBSU30070
E
OPUE
(NRULE_0222)
Sodium/proline symporterBSU06660 BSU03220
Vitamin B6 biosynthesis (PdxS/PdxT pathway)(NFUNC_0059)
必須A
PDXS
(NRULE_0206)
Pyridoxal biosynthesis lyase PdxSBSU00110
PDXT
(NRULE_0207)
Glutamine amidotransferase subunit PdxTBSU00120

ゲノム配列情報

BioProject IDPRJNA76
ローカスタグ
INSDC entriesAL009126
ステータスComplete
解析状況
コンティグ数1
サイズ(bp) 4,215,606
遺伝子数 4,185
フィニッシングゴール
アセンブル方法
冗長度
シーケンス方法
参考文献
  • From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. (Microbiology (Reading). 2009) PMID: 19383706

データダウンロード

ゲノム塩基配列 CDS塩基配列 CDSアミノ酸変換配列 遺伝子/ORF リスト
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