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微生物 : Streptomyces mobaraensis

微生物株情報

NBRC番号 13819
学名 Streptomyces mobaraensis
別名(シノニム) Streptomyces ladakanum
Streptoverticillium ladakanum
Streptoverticillium mobaraense
由来 IFO 13819 <- KCC S-0168 <- Inst. Phys. Chem. Res., Japan (S. Suzuki, IPCR 16-22)
他保存機関番号 ATCC 29032=BCRC 12165=CBS 199.75=DSM 40847=JCM 4168=NCIMB 11159=NRRL B-3729=RIA 1627=VKM Ac-928
他株番号
参考文献
13130042
Taxonomic re-evaluation of whorl-forming Streptomyces (formerly Streptoverticillium) species by using phenotypes, DNA-DNA hybridization and sequences of gyrB, and proposal of Streptomyces luteireticuli (ex Katoh and Arai 1957) corrig., sp. nov., nom. rev. (Int J Syst Evol Microbiol. 2003)
16390180
A novel acylase from Streptomyces mobaraensis that efficiently catalyzes hydrolysis/synthesis of capsaicins as well as N-acyl-L-amino acids and N-acyl-peptides. (J Agric Food Chem. 2006)

推定保有機能 >>詳細

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タイプパターン 構成遺伝子 該当CDS
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemaseH340_25262
Aminoglycoside resistance (by aminoglycoside O-phosphotransferase)(NFUNC_0043)
必須A
APH6
(NRULE_0155)
Streptomycin 6-kinaseH340_13656 H340_28020 H340_23203
Ampicillin resistance(NFUNC_0046)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class AH340_20253
Anthranilate biosynthesis(NFUNC_0038)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseH340_04874 H340_04378
TRPE
(NRULE_0143)
Anthranilate synthase component IH340_22216
Beta-lactam antibiotic resistance(NFUNC_0033)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class AH340_20253
Bleomycin resistance(NFUNC_0021)
必須A
BLE
(NRULE_0096)
Bleomycin resistance proteinH340_17507
GABA biosynthesis(NFUNC_0066)
必須A
GAD
(NRULE_0231)
Glutamate decarboxylaseH340_06541
Hyaluronan degradation(NFUNC_0069)
必須A
HYSA
(NRULE_0232)
Hyaluronate lyaseH340_10635
Macrolide antibiotic resistance(NFUNC_0045)
必須B
RLMA
(NRULE_0165)
23S rRNA (guanine-N(1))-methyltransferaseH340_17722
D
ERE
(NRULE_0168)
Erythromycin esteraseH340_20268 H340_29544
Metal-binding protein(NFUNC_0105)
必須A
MOP
(NRULE_0322)
Putative molybdenum-binding proteinH340_12590 H340_00125 H340_06506 H340_00115
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinH340_00120
F
SOXR
(NRULE_0329)
Redox-sensitive transcriptional activator SoxRH340_15861
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinH340_00120
任意 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinH340_00115
Penicillin resistance(NFUNC_0047)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class AH340_20253
Phenol degradation(NFUNC_0028)
必須B
PHEA1
(NRULE_0083)
Aromatic ring hydroxylaseH340_06276
C
PHEA2
(NRULE_0084)
Aromatic ring hydroxylaseH340_25572
任意 
FDR2
(NRULE_0057)
Ferredoxin reductaseH340_16886
 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentH340_04443
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinH340_29244 H340_30718 H340_25657 H340_19183
 
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseH340_19948 H340_01924 H340_04719 H340_29906 H340_06321 H340_06781 H340_06941
Riboflavin biosynthesis(NFUNC_0058)
必須A
RIBB
(NRULE_0200)
3,4-dihydroxy-2-butanone 4-phosphate synthaseH340_26731
RIBA
(NRULE_0201)
GTP cyclohydrolase-2H340_26731
RIBD
(NRULE_0202)
Riboflavin biosynthesis protein RibDH340_26746
RIBH
(NRULE_0203)
6,7-dimethyl-8-ribityllumazine synthaseH340_26726
RIBE
(NRULE_0204)
Riboflavin synthaseH340_26741
任意 
RIBF
(NRULE_0205)
Riboflavin biosynthesis protein RibFH340_18486
Streptomycin resistance(NFUNC_0054)
必須C
APH6
(NRULE_0155)
Streptomycin 6-kinaseH340_28020 H340_13656 H340_23203
Trehalose biosynthesis (from maltooligosaccharide)(NFUNC_0037)
必須A
TREY
(NRULE_0140)
Maltooligosyl trehalose synthaseH340_21656
TREZ
(NRULE_0141)
Malto-oligosyltrehalose trehalohydrolaseH340_21626
任意 
GLGX
(NRULE_0139)
Glycogen debranching enzymeH340_21661 H340_29479
Trehalose biosynthesis (from maltose)(NFUNC_0034)
必須B
TRES
(NRULE_0128)
Trehalose synthaseH340_16626
Uptake of osmoprotectant(NFUNC_0061)
必須C
BCCT
(NRULE_0220)
BCCT family transporterH340_03604
Vitamin B6 biosynthesis (PdxS/PdxT pathway)(NFUNC_0059)
必須A
PDXS
(NRULE_0206)
Pyridoxal biosynthesis lyase PdxSH340_09455
PDXT
(NRULE_0207)
Glutamine amidotransferase subunit PdxTH340_09460

ゲノム配列情報

BioProject IDPRJNA188290
ローカスタグH340
INSDC entriesAORZ01000000
ステータスWGS
解析状況
コンティグ数266
サイズ(bp) 7,477,811
遺伝子数 6,422
フィニッシングゴール
アセンブル方法Velvet v. 1.2.07
冗長度85.0x
シーケンス方法
  • Illumina HiSeq
参考文献
  • Whole-Genome Shotgun Assembly and Analysis of the Genome of Streptomyces mobaraensis DSM 40847, a Strain for Industrial Production of Microbial Transglutaminase. (Genome Announc. 2013) PMID: 23558536

データダウンロード

ゲノム塩基配列 CDS塩基配列 CDSアミノ酸変換配列 遺伝子/ORF リスト
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FASTA
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