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Microbe : Pseudomonas stutzeri

Microbe Description

NBRC No. 14165
Scientific name Pseudomonas stutzeri
Synonymous name Pseudomonas perfectomarina
History IFO 14165 <- Kansai Med. Univ. (E. Yabuuchi, KM 404) <- R. Hugh, 2601
Other culture collection No. ATCC 17588=CCUG 11256=CFBP 2443=CIP 103022=DSM 5190=JCM 5965=LMG 11199=NCCB 76042=NCIB 11358=VKM B-975
Other No. 2601=KM 404
Reference
5963505
The aerobic pseudomonads: a taxonomic study. (J Gen Microbiol. 1966)

Functional Potential >>Details

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TypePattern Component Gene CDS
Alanine racemization(NFUNC_0063)
RequireA
ALR
(NRULE_0228)
Alanine racemasePSTAB_3618
Aminoglycoside resistance (by aminoglycoside O-nucleotidyltransferase)(NFUNC_0042)
RequireD
ANT3
(NRULE_0154)
Streptomycin 3''-adenylyltransferasePSTAB_2058
Anthranilate biosynthesis(NFUNC_0038)
RequireA
GLAT
(NRULE_0142)
Glutamine amidotransferasePSTAB_0640
TRPE
(NRULE_0143)
Anthranilate synthase component IPSTAB_0639
Aromatic azo compounds degradation(NFUNC_0073)
RequireA
AZOR
(NRULE_0236)
FMN-dependent NADH-azoreductasePSTAB_1543
Arsenical resistance(NFUNC_0004)
RequireD
ARSB2
(NRULE_0016)
Arsenite resistance protein ArsBPSTAB_1985
ARSC1
(NRULE_0017)
Arsenate reductasePSTAB_2848
Participant 
ARSA
(NRULE_0014)
Arsenical pump-driving ATPasePSTAB_0406
 
ARSH
(NRULE_0021)
ArsH proteinPSTAB_1988
Bacitracin resistance(NFUNC_0022)
RequireA
UPPP
(NRULE_0097)
Undecaprenyl-diphosphatasePSTAB_3017 PSTAB_2095
Beta-lactam antibiotic resistance(NFUNC_0033)
RequireD
BLAD
(NRULE_0125)
Beta-lactamase class DPSTAB_2684
Betaine biosynthesis (from choline)(NFUNC_0049)
RequireA
BETA
(NRULE_0175)
Choline dehydrogenasePSTAB_1640
Biotin biosynthesis(NFUNC_0051)
RequireA
BIOF
(NRULE_0182)
8-amino-7-oxononanoate synthasePSTAB_3816
BIOA
(NRULE_0183)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferasePSTAB_3904
BIOD
(NRULE_0184)
ATP-dependent dethiobiotin synthetase BioDPSTAB_3813
BIOB
(NRULE_0185)
Biotin synthasePSTAB_3817
Ectoine biosynthesis(NFUNC_0056)
RequireA
ECTB
(NRULE_0186)
Diaminobutyrate--2-oxoglutarate transaminasePSTAB_0245
ECTA
(NRULE_0187)
L-2,4-diaminobutyric acid acetyltransferasePSTAB_0246
ECTC
(NRULE_0188)
L-ectoine synthasePSTAB_0244
Folate biosynthesis(NFUNC_0044)
RequireB
GLAT
(NRULE_0142)
Glutamine amidotransferasePSTAB_0640
DHPS
(NRULE_0144)
Dihydropteroate synthasePSTAB_3363
FOLA
(NRULE_0147)
Dihydrofolate reductasePSTAB_3977
FOLB
(NRULE_0158)
Dihydroneopterin aldolasePSTAB_1039 PSTAB_0612 PSTAB_1870
FOLK
(NRULE_0159)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinasePSTAB_3342 PSTAB_0613
FOLC
(NRULE_0160)
Bifunctional protein FolCPSTAB_1679
PABB
(NRULE_0161)
Para-aminobenzoate synthase component IPSTAB_1929
PABC
(NRULE_0162)
Aminodeoxychorismate lyasePSTAB_2600
Hydroxyectoine biosynthesis(NFUNC_0057)
RequireA
ECTD
(NRULE_0189)
Ectoine hydroxylasePSTAB_0243
Participant 
ECTB
(NRULE_0186)
Diaminobutyrate--2-oxoglutarate transaminasePSTAB_0245
 
ECTA
(NRULE_0187)
L-2,4-diaminobutyric acid acetyltransferasePSTAB_0246
 
ECTC
(NRULE_0188)
L-ectoine synthasePSTAB_0244
Macrolide antibiotic resistance(NFUNC_0045)
RequireB
RLMA
(NRULE_0165)
23S rRNA (guanine-N(1))-methyltransferasePSTAB_2676
D
ERE
(NRULE_0168)
Erythromycin esterasePSTAB_2648
Mercury resistance(NFUNC_0005)
RequireA
MERA
(NRULE_0008)
Mercuric reductasePSTAB_1235
Metal-binding protein(NFUNC_0105)
RequireA
MOP
(NRULE_0322)
Putative molybdenum-binding proteinPSTAB_0271 PSTAB_2079 PSTAB_2334 PSTAB_3448 PSTAB_1297
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinPSTAB_1299
E
CUER
(NRULE_0328)
Copper-responsive transcriptional regulator CueRPSTAB_3584
F
SOXR
(NRULE_0329)
Redox-sensitive transcriptional activator SoxRPSTAB_1687
I
ISCR
(NRULE_0332)
Rrf2 family transcriptional regulator IscRPSTAB_3090
Molybdate transport (ABC transporter)(NFUNC_0097)
RequireA
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinPSTAB_1299
Participant 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinPSTAB_1298
 
MODC
(NRULE_0326)
Molybdate ABC transporter ATP-binding proteinPSTAB_1297
(R)-pantothenate biosynthesis(NFUNC_0030)
RequireA
PAND
(NRULE_0115)
Aspartate 1-decarboxylasePSTAB_3345
PANB
(NRULE_0116)
3-methyl-2-oxobutanoate hydroxymethyltransferasePSTAB_3343
PANE
(NRULE_0117)
2-dehydropantoate 2-reductasePSTAB_1925 PSTAB_3203
PANC
(NRULE_0118)
Pantothenate synthetasePSTAB_3344
Penicillin resistance(NFUNC_0047)
RequireB
BLAD
(NRULE_0125)
Beta-lactamase class DPSTAB_2684
Phytic acid hydrolysis(NFUNC_0085)
RequireA
PHYT
(NRULE_0258)
3-phytasePSTAB_1842
Pyrroloquinoline quinone biosynthesis(NFUNC_0020)
RequireA
PQQC
(NRULE_0092)
Pyrroloquinoline-quinone synthasePSTAB_1968
Participant 
PQQB
(NRULE_0091)
Coenzyme PQQ synthesis protein BPSTAB_1967
 
PQQD
(NRULE_0093)
Coenzyme PQQ synthesis protein DPSTAB_1969
 
PQQE
(NRULE_0094)
Coenzyme PQQ synthesis protein EPSTAB_1970
 
PQQF
(NRULE_0095)
Coenzyme PQQ synthesis protein FPSTAB_1875
Riboflavin biosynthesis(NFUNC_0058)
RequireA
RIBB
(NRULE_0200)
3,4-dihydroxy-2-butanone 4-phosphate synthasePSTAB_0724
RIBA
(NRULE_0201)
GTP cyclohydrolase-2PSTAB_0730 PSTAB_0724
RIBD
(NRULE_0202)
Riboflavin biosynthesis protein RibDPSTAB_0722
RIBH
(NRULE_0203)
6,7-dimethyl-8-ribityllumazine synthasePSTAB_0725
RIBE
(NRULE_0204)
Riboflavin synthasePSTAB_0723
Participant 
RIBF
(NRULE_0205)
Riboflavin biosynthesis protein RibFPSTAB_0865
Streptomycin resistance(NFUNC_0054)
RequireB
ANT3
(NRULE_0154)
Streptomycin 3''-adenylyltransferasePSTAB_2058
Trehalose biosynthesis (from maltooligosaccharide)(NFUNC_0037)
RequireA
TREY
(NRULE_0140)
Maltooligosyl trehalose synthasePSTAB_2028
TREZ
(NRULE_0141)
Malto-oligosyltrehalose trehalohydrolasePSTAB_2026
Participant 
GLGX
(NRULE_0139)
Glycogen debranching enzymePSTAB_2030
Trehalose biosynthesis (from maltose)(NFUNC_0034)
RequireB
TRES
(NRULE_0128)
Trehalose synthasePSTAB_2041
Trehalose biosynthesis (from NDP-glucose and glucose-6-phosphate)(NFUNC_0031)
RequireA
TPS
(NRULE_0119)
Trehalose-phosphate synthasePSTAB_3283
TPP
(NRULE_0120)
Trehalose-6-phosphate phosphatasePSTAB_3284
Uptake of osmoprotectant(NFUNC_0061)
RequireB
EHUB
(NRULE_0216)
Ectoine ABC transporter substrate-binding proteinPSTAB_0024
EHUC
(NRULE_0217)
Ectoine ABC transporter permease proteinPSTAB_0023
EHUD
(NRULE_0218)
Ectoine ABC transporter permease proteinPSTAB_0022
EHUA
(NRULE_0219)
Ectoine ABC transporter ATP-binding proteinPSTAB_0021
C
BCCT
(NRULE_0220)
BCCT family transporterPSTAB_0536
E
OPUE
(NRULE_0222)
Sodium/proline symporterPSTAB_1156 PSTAB_1153

Genomic Overview

BioProject IDPRJNA68131
Locus_tagPSTAB
INSDC entriesCP002881
Sequence statusComplete
Current status
Contig number1
Size(bp) 4,547,930
Gene 4,217
Finishing goal
Assembly method
Coverage
Technology
Reference
  • Complete genome sequence of the type strain Pseudomonas stutzeri CGMCC 1.1803. (J Bacteriol. 2011) PMID: 21994926

Data Download

Genomic nucleotide sequence Nucleotide sequence of the coding regions Translation of the coding sequneces List of genes / ORFs
FASTA
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FASTA
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FASTA
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TSV
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1.3 MB 1.2 MB 858.1 KB 328.0 KB