English site

微生物 : Kribbella flavida

微生物株情報

NBRC番号 14399
学名 Kribbella flavida
別名(シノニム) 該当データなし
由来 IFO 14399 <- IMAS (J.S. Ruan, 65-N86)
他保存機関番号 CIP 107494=DSM 17836=IMSNU 22160=JCM 10339=KACC 20248=KCTC 9580=NCIMB 13631=NRRL B-16234
他株番号 65-N86
参考文献
10319498
Classification of 'Nocardioides fulvus' IFO 14399 and Nocardioides sp. ATCC 39419 in Kribbella gen. nov., as Kribbella flavida sp. nov. and Kribbella sandramycini sp. nov. (Int J Syst Bacteriol. 1999)

推定保有機能 >>詳細

Download
タイプパターン 構成遺伝子 該当CDS
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemaseKfla_6041
Alginate degradation(NFUNC_0062)
必須B
ALY
(NRULE_0227)
Alginate lyaseKfla_1504
D-allose biosynthesis(NFUNC_0077)
必須A
LRHI
(NRULE_0242)
L-rhamnose isomeraseKfla_0261
Aminoglycoside resistance (by aminoglycoside O-phosphotransferase)(NFUNC_0043)
必須A
APH6
(NRULE_0155)
Streptomycin 6-kinaseKfla_0087 Kfla_6595 Kfla_4850 Kfla_2389 Kfla_2175 Kfla_0344
B
APH3
(NRULE_0156)
Aminoglycoside 3'-phosphotransferaseKfla_3320
Ampicillin resistance(NFUNC_0046)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class AKfla_4213
Anthranilate biosynthesis(NFUNC_0038)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseKfla_4134 Kfla_0059
TRPE
(NRULE_0143)
Anthranilate synthase component IKfla_3062
Aromatic azo compounds degradation(NFUNC_0073)
必須A
AZOR
(NRULE_0236)
FMN-dependent NADH-azoreductaseKfla_3134
Bacitracin resistance(NFUNC_0022)
必須A
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseKfla_3811
Beta-lactam antibiotic resistance(NFUNC_0033)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class AKfla_4213
C
BLAC
(NRULE_0124)
Beta-lactamase class CKfla_0870
Cephalosporin resistance(NFUNC_0048)
必須A
BLAC
(NRULE_0124)
Beta-lactamase class CKfla_0870
任意 
BLAA
(NRULE_0122)
Beta-lactamase class AKfla_4213
Freeze resistance (by antifreeze protein)(NFUNC_0019)
必須A
AFP
(NRULE_0089)
Ice-structuring proteinKfla_2946
Kanamycin resistance(NFUNC_0052)
必須C
APH3
(NRULE_0156)
Aminoglycoside 3'-phosphotransferaseKfla_3320
Macrolide antibiotic resistance(NFUNC_0045)
必須D
ERE
(NRULE_0168)
Erythromycin esteraseKfla_1119 Kfla_6966 Kfla_3493
Metal-binding protein(NFUNC_0105)
必須A
MOP
(NRULE_0322)
Putative molybdenum-binding proteinKfla_6497 Kfla_6494 Kfla_1064 Kfla_6972
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinKfla_5626 Kfla_6495
F
SOXR
(NRULE_0329)
Redox-sensitive transcriptional activator SoxRKfla_3638 Kfla_1985 Kfla_1066
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinKfla_5626 Kfla_6495
任意 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinKfla_6496
(R)-pantothenate biosynthesis(NFUNC_0030)
必須A
PAND
(NRULE_0115)
Aspartate 1-decarboxylaseKfla_1213
PANB
(NRULE_0116)
3-methyl-2-oxobutanoate hydroxymethyltransferaseKfla_2613
PANE
(NRULE_0117)
2-dehydropantoate 2-reductaseKfla_2127 Kfla_1888
PANC
(NRULE_0118)
Pantothenate synthetaseKfla_6447
Penicillin resistance(NFUNC_0047)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class AKfla_4213
Phytic acid hydrolysis(NFUNC_0085)
必須A
PHYT
(NRULE_0258)
3-phytaseKfla_6868 Kfla_3849
Streptomycin resistance(NFUNC_0054)
必須C
APH6
(NRULE_0155)
Streptomycin 6-kinaseKfla_2389 Kfla_0087 Kfla_0344 Kfla_6595 Kfla_4850 Kfla_2175
任意 
APH3
(NRULE_0156)
Aminoglycoside 3'-phosphotransferaseKfla_3320
Trehalose biosynthesis (from maltooligosaccharide)(NFUNC_0037)
必須A
TREY
(NRULE_0140)
Maltooligosyl trehalose synthaseKfla_0737
TREZ
(NRULE_0141)
Malto-oligosyltrehalose trehalohydrolaseKfla_0738
任意 
GLGX
(NRULE_0139)
Glycogen debranching enzymeKfla_4935 Kfla_0736
Trehalose biosynthesis (from maltose)(NFUNC_0034)
必須B
TRES
(NRULE_0128)
Trehalose synthaseKfla_4951
Trehalose biosynthesis (from NDP-glucose and glucose-6-phosphate)(NFUNC_0031)
必須A
TPS
(NRULE_0119)
Trehalose-phosphate synthaseKfla_1215
TPP
(NRULE_0120)
Trehalose-6-phosphate phosphataseKfla_1220
Uptake of osmoprotectant(NFUNC_0061)
必須C
BCCT
(NRULE_0220)
BCCT family transporterKfla_3665
Vancomycin resistance (via D-Ala-D-Lac precursor)(NFUNC_0089)
必須A
VANA
(NRULE_0265)
D-alanine--D-lactate ligaseKfla_3620
VANH
(NRULE_0266)
D-specific alpha-keto acid dehydrogenaseKfla_3619
VANX
(NRULE_0267)
D-alanyl-D-alanine dipeptidaseKfla_3621
任意 
VANR
(NRULE_0284)
Two-component system response regulator VanRKfla_3625
 
VANS
(NRULE_0290)
Two-component system histidine kinase VanSKfla_3624
Vitamin B6 biosynthesis (PdxS/PdxT pathway)(NFUNC_0059)
必須A
PDXS
(NRULE_0206)
Pyridoxal biosynthesis lyase PdxSKfla_4427
PDXT
(NRULE_0207)
Glutamine amidotransferase subunit PdxTKfla_4409

ゲノム配列情報

BioProject IDPRJNA21089
ローカスタグKFLA
INSDC entriesCP001736
ステータスComplete
解析状況
コンティグ数1
サイズ(bp) 7,579,488
遺伝子数 6,943
フィニッシングゴール
アセンブル方法
冗長度
シーケンス方法
参考文献
  • Complete genome sequence of Kribbella flavida type strain (IFO 14399). (Stand Genomic Sci. 2010) PMID: 21304701

データダウンロード

ゲノム塩基配列 CDS塩基配列 CDSアミノ酸変換配列 遺伝子/ORF リスト
FASTA
gz
FASTA
gz
FASTA
gz
TSV
uncompressed
2.1 MB 1.9 MB 1.4 MB 539.9 KB