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微生物 : Saccharomonospora glauca

微生物株情報

NBRC番号 14831
学名 Saccharomonospora glauca
別名(シノニム) 該当データなし
由来 IFO 14831 <- Inst. Microbiol., Technol. Hochschul. Darmstadt (H.J. Kutzner, K 62) <- DSM 43769
他保存機関番号 DSM 43769=JCM 7444
他株番号 K 62
参考文献
13927630
Studies on peat and peat microorganism. I. Taxonomic studies on thermophilic Actinomycetes isolated from peat. (Arch Mikrobiol. 1963)

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タイプパターン 構成遺伝子 該当CDS
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemaseSacglDRAFT_00515
Aminoglycoside resistance (by aminoglycoside N-acetyltransferase)(NFUNC_0041)
必須A
AAC3
(NRULE_0149)
Aminoglycoside N(3')-acetyltransferaseSacglDRAFT_00925
Aminoglycoside resistance (by aminoglycoside O-phosphotransferase)(NFUNC_0043)
必須B
APH3
(NRULE_0156)
Aminoglycoside 3'-phosphotransferaseSacglDRAFT_00408
Ampicillin resistance(NFUNC_0046)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class ASacglDRAFT_01897
Anthranilate biosynthesis(NFUNC_0038)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseSacglDRAFT_00089
TRPE
(NRULE_0143)
Anthranilate synthase component ISacglDRAFT_03189
Bacitracin resistance(NFUNC_0022)
必須A
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseSacglDRAFT_02181
Beta-lactam antibiotic resistance(NFUNC_0033)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class ASacglDRAFT_01897
Betaine biosynthesis (from choline)(NFUNC_0049)
必須A
BETA
(NRULE_0175)
Choline dehydrogenaseSacglDRAFT_03539
C
CHOX
(NRULE_0178)
Choline oxidaseSacglDRAFT_02719
Betaine biosynthesis (from glycine)(NFUNC_0050)
必須B
GSDMT
(NRULE_0181)
Glycine/sarcosine/dimethylglycine N-methyltransferaseSacglDRAFT_03074
Bioplastic degradation(NFUNC_0015)
必須B
PHAZ2
(NRULE_0080)
Poly(3-hydroxyalkanoate) depolymeraseSacglDRAFT_03543
Ectoine biosynthesis(NFUNC_0056)
必須A
ECTB
(NRULE_0186)
Diaminobutyrate--2-oxoglutarate transaminaseSacglDRAFT_03856
ECTA
(NRULE_0187)
L-2,4-diaminobutyric acid acetyltransferaseSacglDRAFT_03857
ECTC
(NRULE_0188)
L-ectoine synthaseSacglDRAFT_03855
Hydroxyectoine biosynthesis(NFUNC_0057)
必須A
ECTD
(NRULE_0189)
Ectoine hydroxylaseSacglDRAFT_03854
任意 
ECTB
(NRULE_0186)
Diaminobutyrate--2-oxoglutarate transaminaseSacglDRAFT_03856
 
ECTA
(NRULE_0187)
L-2,4-diaminobutyric acid acetyltransferaseSacglDRAFT_03857
 
ECTC
(NRULE_0188)
L-ectoine synthaseSacglDRAFT_03855
Kanamycin resistance(NFUNC_0052)
必須C
APH3
(NRULE_0156)
Aminoglycoside 3'-phosphotransferaseSacglDRAFT_00408
任意 
AAC3
(NRULE_0149)
Aminoglycoside N(3')-acetyltransferaseSacglDRAFT_00925
Mercury resistance(NFUNC_0005)
必須A
MERA
(NRULE_0008)
Mercuric reductaseSacglDRAFT_02358
Metal-binding protein(NFUNC_0105)
必須A
MOP
(NRULE_0322)
Putative molybdenum-binding proteinSacglDRAFT_02390 SacglDRAFT_03787 SacglDRAFT_03784
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinSacglDRAFT_03786 SacglDRAFT_00693
F
SOXR
(NRULE_0329)
Redox-sensitive transcriptional activator SoxRSacglDRAFT_01205
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinSacglDRAFT_03786 SacglDRAFT_00693
任意 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinSacglDRAFT_03785
Penicillin resistance(NFUNC_0047)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class ASacglDRAFT_01897
Pyrroloquinoline quinone biosynthesis(NFUNC_0020)
必須A
PQQC
(NRULE_0092)
Pyrroloquinoline-quinone synthaseSacglDRAFT_02133
任意 
PQQB
(NRULE_0091)
Coenzyme PQQ synthesis protein BSacglDRAFT_02130
 
PQQE
(NRULE_0094)
Coenzyme PQQ synthesis protein ESacglDRAFT_02131
Streptogramin resistance(NFUNC_0027)
必須B
VGB
(NRULE_0114)
Virginiamycin B lyaseSacglDRAFT_00520
Trehalose biosynthesis (from NDP-glucose and glucose-6-phosphate)(NFUNC_0031)
必須A
TPS
(NRULE_0119)
Trehalose-phosphate synthaseSacglDRAFT_03893
TPP
(NRULE_0120)
Trehalose-6-phosphate phosphataseSacglDRAFT_03894
Uptake of osmoprotectant(NFUNC_0061)
必須B
EHUB
(NRULE_0216)
Ectoine ABC transporter substrate-binding proteinSacglDRAFT_03334
EHUC
(NRULE_0217)
Ectoine ABC transporter permease proteinSacglDRAFT_03333
EHUD
(NRULE_0218)
Ectoine ABC transporter permease proteinSacglDRAFT_03332
EHUA
(NRULE_0219)
Ectoine ABC transporter ATP-binding proteinSacglDRAFT_03331
C
BCCT
(NRULE_0220)
BCCT family transporterSacglDRAFT_00113 SacglDRAFT_03538 SacglDRAFT_02636 SacglDRAFT_00157

ゲノム配列情報

BioProject IDPRJNA63505
ローカスタグSACGLDRAFT
INSDC entriesAGJI02000000
ステータスWGS
解析状況Noncontiguous Finished
コンティグ数11
サイズ(bp) 4,563,208
遺伝子数 4,244
フィニッシングゴールNoncontiguous Finished
アセンブル方法Newbler v. 2.3
冗長度30x
シーケンス方法
  • 454
  • Illumina
参考文献

データダウンロード

ゲノム塩基配列 CDS塩基配列 CDSアミノ酸変換配列 遺伝子/ORF リスト
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