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Microbe : Chryseobacterium gleum

Microbe Description

NBRC No. 15054
Scientific name Chryseobacterium gleum
Synonymous name Flavobacterium gleum
History IFO 15054 <- ATCC 35910 <- R.J. Owen
Other culture collection No. ATCC 35910=CCUG 14555=CIP 103039=JCM 2410=LMG 8334=NCTC 11432
Other No.
Reference
Not assigned

Functional Potential >>Details

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TypePattern Component Gene CDS
Alanine racemization(NFUNC_0063)
RequireA
ALR
(NRULE_0228)
Alanine racemaseHMPREF0204_10265
Alginate degradation(NFUNC_0062)
RequireB
ALY
(NRULE_0227)
Alginate lyaseHMPREF0204_13464
Aromatic azo compounds degradation(NFUNC_0073)
RequireA
AZOR
(NRULE_0236)
FMN-dependent NADH-azoreductaseHMPREF0204_13370 HMPREF0204_11428
Bacitracin resistance(NFUNC_0022)
RequireA
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseHMPREF0204_14621
Beta-lactam antibiotic resistance(NFUNC_0033)
RequireD
BLAD
(NRULE_0125)
Beta-lactamase class DHMPREF0204_10459
Chloramphenicol resistance(NFUNC_0025)
RequireA
CAT1
(NRULE_0107)
Chloramphenicol acetyltransferaseHMPREF0204_13820
Mercury resistance(NFUNC_0005)
RequireA
MERA
(NRULE_0008)
Mercuric reductaseHMPREF0204_12980
Metal-binding protein(NFUNC_0105)
RequireC
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinHMPREF0204_13743 HMPREF0204_13228
Molybdate transport (ABC transporter)(NFUNC_0097)
RequireA
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinHMPREF0204_13228 HMPREF0204_13743
Participant 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinHMPREF0204_13229
(R)-pantothenate biosynthesis(NFUNC_0030)
RequireA
PAND
(NRULE_0115)
Aspartate 1-decarboxylaseHMPREF0204_12049
PANB
(NRULE_0116)
3-methyl-2-oxobutanoate hydroxymethyltransferaseHMPREF0204_11068
PANE
(NRULE_0117)
2-dehydropantoate 2-reductaseHMPREF0204_14278
PANC
(NRULE_0118)
Pantothenate synthetaseHMPREF0204_11466
Penicillin resistance(NFUNC_0047)
RequireB
BLAD
(NRULE_0125)
Beta-lactamase class DHMPREF0204_10459
Phytic acid hydrolysis(NFUNC_0085)
RequireA
PHYT
(NRULE_0258)
3-phytaseHMPREF0204_14259

Genomic Overview

BioProject IDPRJNA30953
Locus_tagHMPREF0204
INSDC entriesACKQ02000000
Sequence statusWGS
Current statusImproved High-Quality Draft
Contig number7
Size(bp) 5,569,640
Gene 5,289
Finishing goalImproved High-Quality Draft
Assembly methodNewbler Assembler v. 2.3.10192009
Coverage31.57x
Technology
  • 454
Reference

Data Download

Genomic nucleotide sequence Nucleotide sequence of the coding regions Translation of the coding sequneces List of genes / ORFs
FASTA
gz
FASTA
gz
FASTA
gz
TSV
uncompressed
1.6 MB 1.6 MB 1.0 MB 447.8 KB