Microbe : Chryseobacterium gleum

Microbe Description

NBRC No.	15054
Scientific name	Chryseobacterium gleum
Synonymous name	Flavobacterium gleum
History	IFO 15054 <- ATCC 35910 <- R.J. Owen
Other culture collection No.	ATCC 35910=CCUG 14555=CIP 103039=JCM 2410=LMG 8334=NCTC 11432
Other No.
Reference	Not assigned

Functional Potential >>Details


Type	Pattern	Component Gene		CDS
Alanine racemization(NFUNC_0063)
Require	A	ALR (NRULE_0228)	Alanine racemase	HMPREF0204_10265
Alginate degradation(NFUNC_0062)
Require	B	ALY (NRULE_0227)	Alginate lyase	HMPREF0204_13464
Aromatic azo compounds degradation(NFUNC_0073)
Require	A	AZOR (NRULE_0236)	FMN-dependent NADH-azoreductase	HMPREF0204_13370 HMPREF0204_11428
Bacitracin resistance(NFUNC_0022)
Require	A	UPPP (NRULE_0097)	Undecaprenyl-diphosphatase	HMPREF0204_14621
Beta-lactam antibiotic resistance(NFUNC_0033)
Require	D	BLAD (NRULE_0125)	Beta-lactamase class D	HMPREF0204_10459
Chloramphenicol resistance(NFUNC_0025)
Require	A	CAT1 (NRULE_0107)	Chloramphenicol acetyltransferase	HMPREF0204_13820
Mercury resistance(NFUNC_0005)
Require	A	MERA (NRULE_0008)	Mercuric reductase	HMPREF0204_12980
Metal-binding protein(NFUNC_0105)
Require	C	MODA (NRULE_0324)	Molybdate ABC transporter substrate-binding protein	HMPREF0204_13743 HMPREF0204_13228
Molybdate transport (ABC transporter)(NFUNC_0097)
Require	A	MODA (NRULE_0324)	Molybdate ABC transporter substrate-binding protein	HMPREF0204_13228 HMPREF0204_13743
Participant		MODB (NRULE_0325)	Molybdate ABC transporter permease protein	HMPREF0204_13229
(R)-pantothenate biosynthesis(NFUNC_0030)
Require	A	PAND (NRULE_0115)	Aspartate 1-decarboxylase	HMPREF0204_12049
		PANB (NRULE_0116)	3-methyl-2-oxobutanoate hydroxymethyltransferase	HMPREF0204_11068
		PANE (NRULE_0117)	2-dehydropantoate 2-reductase	HMPREF0204_14278
		PANC (NRULE_0118)	Pantothenate synthetase	HMPREF0204_11466
Penicillin resistance(NFUNC_0047)
Require	B	BLAD (NRULE_0125)	Beta-lactamase class D	HMPREF0204_10459
Phytic acid hydrolysis(NFUNC_0085)
Require	A	PHYT (NRULE_0258)	3-phytase	HMPREF0204_14259

Genomic Overview

BioProject ID	PRJNA30953
Locus_tag	HMPREF0204
INSDC entries	ACKQ02000000
Sequence status	WGS
Current status	Improved High-Quality Draft
Contig number	7
Size(bp)	5,569,640
Gene	5,289
Finishing goal	Improved High-Quality Draft
Assembly method	Newbler Assembler v. 2.3.10192009
Coverage	31.57x
Technology	454

Reference

Data Download

Genomic nucleotide sequence	Nucleotide sequence of the coding regions	Translation of the coding sequneces	List of genes / ORFs
FASTA gz	FASTA gz	FASTA gz	TSV uncompressed

1.6 MB	1.6 MB	1.0 MB	447.8 KB