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微生物 : Paenibacillus peoriae

微生物株情報

NBRC番号 15541
学名 Paenibacillus peoriae
別名（シノニム） Bacillus peoriae
由来 IFO 15541 <- NRRL B-14750 <- Lab. Cytologie Vegetative, Paris, France (B. Delaporte, 11.B.9)
他保存機関番号 ATCC 51925=CIP 103812=DSM 8320=LMG 14832=NRRL B-14750=NRRL BD-57
他株番号 11.B.9
参考文献
8863428
A polyphasic reassessment of the genus Paenibacillus, reclassification of Bacillus lautus (Nakamura 1984) as Paenibacillus lautus comb. nov. and of Bacillus peoriae (Montefusco et al. 1993) as Paenibacillus peoriae comb. nov., and emended descriptions of P. lautus and of P. peoriae. (Int J Syst Bacteriol. 1996)
9103612
Transfer of Bacillus alginolyticus, Bacillus chondroitinus, Bacillus curdlanolyticus, Bacillus glucanolyticus, Bacillus kobensis, and Bacillus thiaminolyticus to the genus Paenibacillus and emended description of the genus Paenibacillus. (Int J Syst Bacteriol. 1997)

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タイプパターン 構成遺伝子 該当CDS
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemasePpeoK3_010100023488
D-allose biosynthesis(NFUNC_0077)
必須A
LRHI
(NRULE_0242)
L-rhamnose isomerasePpeoK3_010100007076
Anthranilate biosynthesis(NFUNC_0038)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferasePpeoK3_010100024084
TRPE
(NRULE_0143)
Anthranilate synthase component IPpeoK3_010100005565
Aromatic azo compounds degradation(NFUNC_0073)
必須A
AZOR
(NRULE_0236)
FMN-dependent NADH-azoreductasePpeoK3_010100001385 PpeoK3_010100007746 PpeoK3_010100001820 PpeoK3_010100001550
Bacitracin resistance(NFUNC_0022)
必須A
UPPP
(NRULE_0097)
Undecaprenyl-diphosphatasePpeoK3_010100000130
Biotin biosynthesis(NFUNC_0051)
必須A
BIOF
(NRULE_0182)
8-amino-7-oxononanoate synthasePpeoK3_010100015226
BIOA
(NRULE_0183)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferasePpeoK3_010100015216
BIOD
(NRULE_0184)
ATP-dependent dethiobiotin synthetase BioDPpeoK3_010100015221
BIOB
(NRULE_0185)
Biotin synthasePpeoK3_010100017299
Metal-binding protein(NFUNC_0105)
必須A
MOP
(NRULE_0322)
Putative molybdenum-binding proteinPpeoK3_010100019686
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinPpeoK3_010100015665 PpeoK3_010100009508 PpeoK3_010100020588 PpeoK3_010100002085 PpeoK3_010100000265 PpeoK3_010100011622 PpeoK3_010100012652
D
MNTR
(NRULE_0327)
DtxR family transcriptional regulator MntRPpeoK3_010100004850
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinPpeoK3_010100002085 PpeoK3_010100000265 PpeoK3_010100009508 PpeoK3_010100020588 PpeoK3_010100015665 PpeoK3_010100012652 PpeoK3_010100011622
任意 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinPpeoK3_010100012657
(R)-pantothenate biosynthesis(NFUNC_0030)
必須A
PAND
(NRULE_0115)
Aspartate 1-decarboxylasePpeoK3_010100005705
PANB
(NRULE_0116)
3-methyl-2-oxobutanoate hydroxymethyltransferasePpeoK3_010100005695
PANE
(NRULE_0117)
2-dehydropantoate 2-reductasePpeoK3_010100003735
PANC
(NRULE_0118)
Pantothenate synthetasePpeoK3_010100005700
Phytic acid hydrolysis(NFUNC_0085)
必須A
PHYT
(NRULE_0258)
3-phytasePpeoK3_010100019391
Riboflavin biosynthesis(NFUNC_0058)
必須A
RIBB
(NRULE_0200)
3,4-dihydroxy-2-butanone 4-phosphate synthasePpeoK3_010100005315
RIBA
(NRULE_0201)
GTP cyclohydrolase-2PpeoK3_010100008891
RIBD
(NRULE_0202)
Riboflavin biosynthesis protein RibDPpeoK3_010100008886
RIBH
(NRULE_0203)
6,7-dimethyl-8-ribityllumazine synthasePpeoK3_010100005320
RIBE
(NRULE_0204)
Riboflavin synthasePpeoK3_010100005310
任意 
RIBF
(NRULE_0205)
Riboflavin biosynthesis protein RibFPpeoK3_010100008276
Uptake of osmoprotectant(NFUNC_0061)
必須A
OPUAC
(NRULE_0213)
Osmoprotectant ABC transporter substrate-binding proteinPpeoK3_010100023643
OPUAB
(NRULE_0214)
Osmoprotectant ABC transporter permease proteinPpeoK3_010100023643
OPUAA
(NRULE_0215)
Osmoprotectant ABC transporter ATP-binding proteinPpeoK3_010100023638
Vitamin B6 biosynthesis (PdxS/PdxT pathway)(NFUNC_0059)
必須A
PDXS
(NRULE_0206)
Pyridoxal biosynthesis lyase PdxSPpeoK3_010100009303
PDXT
(NRULE_0207)
Glutamine amidotransferase subunit PdxTPpeoK3_010100009308

ゲノム配列情報

BioProject IDPRJNA167853
ローカスタグ
INSDC entriesNZ_AGFX01000000
ステータスWGS
解析状況
コンティグ数49
サイズ(bp) 5,771,987
遺伝子数 5,072
フィニッシングゴール
アセンブル方法CLC Genomics Workbench v. 4.7.2
冗長度1000x
シーケンス方法
  • Illumina GAIIx (121-nt cycle)
参考文献

データダウンロード

ゲノム塩基配列 CDS塩基配列 CDSアミノ酸変換配列 遺伝子/ORF リスト
FASTA
gz		 FASTA
gz		 FASTA
gz		 TSV
uncompressed
1.7 MB 1.6 MB 1.0 MB 455.8 KB