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Microbe : Paenibacillus peoriae

Microbe Description

NBRC No. 15541
Scientific name Paenibacillus peoriae
Synonymous name Bacillus peoriae
History IFO 15541 <- NRRL B-14750 <- Lab. Cytologie Vegetative, Paris, France (B. Delaporte, 11.B.9)
Other culture collection No. ATCC 51925=CIP 103812=DSM 8320=LMG 14832=NRRL B-14750=NRRL BD-57
Other No. 11.B.9
Reference
8863428
A polyphasic reassessment of the genus Paenibacillus, reclassification of Bacillus lautus (Nakamura 1984) as Paenibacillus lautus comb. nov. and of Bacillus peoriae (Montefusco et al. 1993) as Paenibacillus peoriae comb. nov., and emended descriptions of P. lautus and of P. peoriae. (Int J Syst Bacteriol. 1996)
9103612
Transfer of Bacillus alginolyticus, Bacillus chondroitinus, Bacillus curdlanolyticus, Bacillus glucanolyticus, Bacillus kobensis, and Bacillus thiaminolyticus to the genus Paenibacillus and emended description of the genus Paenibacillus. (Int J Syst Bacteriol. 1997)

Functional Potential >>Details

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TypePattern Component Gene CDS
Alanine racemization(NFUNC_0063)
RequireA
ALR
(NRULE_0228)
Alanine racemasePpeoK3_010100023488
D-allose biosynthesis(NFUNC_0077)
RequireA
LRHI
(NRULE_0242)
L-rhamnose isomerasePpeoK3_010100007076
Anthranilate biosynthesis(NFUNC_0038)
RequireA
GLAT
(NRULE_0142)
Glutamine amidotransferasePpeoK3_010100024084
TRPE
(NRULE_0143)
Anthranilate synthase component IPpeoK3_010100005565
Aromatic azo compounds degradation(NFUNC_0073)
RequireA
AZOR
(NRULE_0236)
FMN-dependent NADH-azoreductasePpeoK3_010100001385 PpeoK3_010100007746 PpeoK3_010100001820 PpeoK3_010100001550
Bacitracin resistance(NFUNC_0022)
RequireA
UPPP
(NRULE_0097)
Undecaprenyl-diphosphatasePpeoK3_010100000130
Biotin biosynthesis(NFUNC_0051)
RequireA
BIOF
(NRULE_0182)
8-amino-7-oxononanoate synthasePpeoK3_010100015226
BIOA
(NRULE_0183)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferasePpeoK3_010100015216
BIOD
(NRULE_0184)
ATP-dependent dethiobiotin synthetase BioDPpeoK3_010100015221
BIOB
(NRULE_0185)
Biotin synthasePpeoK3_010100017299
Metal-binding protein(NFUNC_0105)
RequireA
MOP
(NRULE_0322)
Putative molybdenum-binding proteinPpeoK3_010100019686
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinPpeoK3_010100015665 PpeoK3_010100009508 PpeoK3_010100020588 PpeoK3_010100002085 PpeoK3_010100000265 PpeoK3_010100011622 PpeoK3_010100012652
D
MNTR
(NRULE_0327)
DtxR family transcriptional regulator MntRPpeoK3_010100004850
Molybdate transport (ABC transporter)(NFUNC_0097)
RequireA
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinPpeoK3_010100002085 PpeoK3_010100000265 PpeoK3_010100009508 PpeoK3_010100020588 PpeoK3_010100015665 PpeoK3_010100012652 PpeoK3_010100011622
Participant 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinPpeoK3_010100012657
(R)-pantothenate biosynthesis(NFUNC_0030)
RequireA
PAND
(NRULE_0115)
Aspartate 1-decarboxylasePpeoK3_010100005705
PANB
(NRULE_0116)
3-methyl-2-oxobutanoate hydroxymethyltransferasePpeoK3_010100005695
PANE
(NRULE_0117)
2-dehydropantoate 2-reductasePpeoK3_010100003735
PANC
(NRULE_0118)
Pantothenate synthetasePpeoK3_010100005700
Phytic acid hydrolysis(NFUNC_0085)
RequireA
PHYT
(NRULE_0258)
3-phytasePpeoK3_010100019391
Riboflavin biosynthesis(NFUNC_0058)
RequireA
RIBB
(NRULE_0200)
3,4-dihydroxy-2-butanone 4-phosphate synthasePpeoK3_010100005315
RIBA
(NRULE_0201)
GTP cyclohydrolase-2PpeoK3_010100008891
RIBD
(NRULE_0202)
Riboflavin biosynthesis protein RibDPpeoK3_010100008886
RIBH
(NRULE_0203)
6,7-dimethyl-8-ribityllumazine synthasePpeoK3_010100005320
RIBE
(NRULE_0204)
Riboflavin synthasePpeoK3_010100005310
Participant 
RIBF
(NRULE_0205)
Riboflavin biosynthesis protein RibFPpeoK3_010100008276
Uptake of osmoprotectant(NFUNC_0061)
RequireA
OPUAC
(NRULE_0213)
Osmoprotectant ABC transporter substrate-binding proteinPpeoK3_010100023643
OPUAB
(NRULE_0214)
Osmoprotectant ABC transporter permease proteinPpeoK3_010100023643
OPUAA
(NRULE_0215)
Osmoprotectant ABC transporter ATP-binding proteinPpeoK3_010100023638
Vitamin B6 biosynthesis (PdxS/PdxT pathway)(NFUNC_0059)
RequireA
PDXS
(NRULE_0206)
Pyridoxal biosynthesis lyase PdxSPpeoK3_010100009303
PDXT
(NRULE_0207)
Glutamine amidotransferase subunit PdxTPpeoK3_010100009308

Genomic Overview

BioProject IDPRJNA167853
Locus_tag
INSDC entriesNZ_AGFX01000000
Sequence statusWGS
Current status
Contig number49
Size(bp) 5,771,987
Gene 5,072
Finishing goal
Assembly methodCLC Genomics Workbench v. 4.7.2
Coverage1000x
Technology
  • Illumina GAIIx (121-nt cycle)
Reference

Data Download

Genomic nucleotide sequence Nucleotide sequence of the coding regions Translation of the coding sequneces List of genes / ORFs
FASTA
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FASTA
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FASTA
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TSV
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1.7 MB 1.6 MB 1.0 MB 455.8 KB