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Microbe : Streptosporangium roseum

Microbe Description

NBRC No. 3776
Scientific name Streptosporangium roseum
Synonymous name Not assigned
History IFO 3776 <- NI 9100 <- J.N. Couch, ip-15
Other culture collection No. ATCC 12428=DSM 43021=JCM 3005=NRRL 2505=VKM Ac-807
Other No.
Reference
Not assigned

Functional Potential >>Details

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TypePattern Component Gene CDS
Alanine racemization(NFUNC_0063)
RequireA
ALR
(NRULE_0228)
Alanine racemaseSros_1141
D-allose biosynthesis(NFUNC_0077)
RequireA
LRHI
(NRULE_0242)
L-rhamnose isomeraseSros_0428
Aminoglycoside resistance (by aminoglycoside O-nucleotidyltransferase)(NFUNC_0042)
RequireC
ANT2
(NRULE_0153)
2''-aminoglycoside nucleotidyltransferaseSros_0450
Aminoglycoside resistance (by aminoglycoside O-phosphotransferase)(NFUNC_0043)
RequireA
APH6
(NRULE_0155)
Streptomycin 6-kinaseSros_5378
B
APH3
(NRULE_0156)
Aminoglycoside 3'-phosphotransferaseSros_3941 Sros_0454 Sros_6646
Ampicillin resistance(NFUNC_0046)
RequireA
BLAA
(NRULE_0122)
Beta-lactamase class ASros_7334 Sros_5706
Participant 
BLAD
(NRULE_0125)
Beta-lactamase class DSros_8961
Anthranilate biosynthesis(NFUNC_0038)
RequireA
GLAT
(NRULE_0142)
Glutamine amidotransferaseSros_0110 Sros_3761
TRPE
(NRULE_0143)
Anthranilate synthase component ISros_3982
Aromatic azo compounds degradation(NFUNC_0073)
RequireA
AZOR
(NRULE_0236)
FMN-dependent NADH-azoreductaseSros_4014 Sros_5333 Sros_5486
Bacitracin resistance(NFUNC_0022)
RequireA
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseSros_0789
Beta-lactam antibiotic resistance(NFUNC_0033)
RequireA
BLAA
(NRULE_0122)
Beta-lactamase class ASros_7334 Sros_5706
D
BLAD
(NRULE_0125)
Beta-lactamase class DSros_8961
Betaine biosynthesis (from choline)(NFUNC_0049)
RequireA
BETA
(NRULE_0175)
Choline dehydrogenaseSros_3854
Freeze resistance (by antifreeze protein)(NFUNC_0019)
RequireA
AFP
(NRULE_0089)
Ice-structuring proteinSros_6489
Gentamicin resistance(NFUNC_0053)
RequireA
ANT2
(NRULE_0153)
2''-aminoglycoside nucleotidyltransferaseSros_0450
Kanamycin resistance(NFUNC_0052)
RequireB
ANT2
(NRULE_0153)
2''-aminoglycoside nucleotidyltransferaseSros_0450
C
APH3
(NRULE_0156)
Aminoglycoside 3'-phosphotransferaseSros_0454 Sros_6646 Sros_3941
Macrolide antibiotic resistance(NFUNC_0045)
RequireB
RLMA
(NRULE_0165)
23S rRNA (guanine-N(1))-methyltransferaseSros_0404
D
ERE
(NRULE_0168)
Erythromycin esteraseSros_5057
F
MGT
(NRULE_0170)
Macrolide glycosyltransferaseSros_8226
Metal-binding protein(NFUNC_0105)
RequireA
MOP
(NRULE_0322)
Putative molybdenum-binding proteinSros_9032 Sros_9029 Sros_3490
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinSros_9031 Sros_2364 Sros_6584 Sros_8236
F
SOXR
(NRULE_0329)
Redox-sensitive transcriptional activator SoxRSros_3207 Sros_9086 Sros_2489
Molybdate transport (ABC transporter)(NFUNC_0097)
RequireA
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinSros_2364 Sros_8236 Sros_9031 Sros_6584
Participant 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinSros_9030
Penicillin resistance(NFUNC_0047)
RequireA
BLAA
(NRULE_0122)
Beta-lactamase class ASros_7334 Sros_5706
B
BLAD
(NRULE_0125)
Beta-lactamase class DSros_8961
Phenol degradation(NFUNC_0028)
RequireB
PHEA1
(NRULE_0083)
Aromatic ring hydroxylaseSros_6973
Participant 
FDR2
(NRULE_0057)
Ferredoxin reductaseSros_2784 Sros_4928
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinSros_6044 Sros_6610 Sros_5985 Sros_3851 Sros_2675 Sros_0513 Sros_6043
 
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseSros_2092 Sros_6600 Sros_6997 Sros_8176 Sros_8271 Sros_3429
Phytic acid hydrolysis(NFUNC_0085)
RequireA
PHYT
(NRULE_0258)
3-phytaseSros_5553
Riboflavin biosynthesis(NFUNC_0058)
RequireA
RIBB
(NRULE_0200)
3,4-dihydroxy-2-butanone 4-phosphate synthaseSros_2835
RIBA
(NRULE_0201)
GTP cyclohydrolase-2Sros_2835
RIBD
(NRULE_0202)
Riboflavin biosynthesis protein RibDSros_2832
RIBH
(NRULE_0203)
6,7-dimethyl-8-ribityllumazine synthaseSros_2836
RIBE
(NRULE_0204)
Riboflavin synthaseSros_2833
Participant 
RIBF
(NRULE_0205)
Riboflavin biosynthesis protein RibFSros_2129
Streptogramin resistance(NFUNC_0027)
RequireB
VGB
(NRULE_0114)
Virginiamycin B lyaseSros_7528
Streptomycin resistance(NFUNC_0054)
RequireC
APH6
(NRULE_0155)
Streptomycin 6-kinaseSros_5378
Participant 
APH3
(NRULE_0156)
Aminoglycoside 3'-phosphotransferaseSros_6646 Sros_0454 Sros_3941
Trehalose biosynthesis (from maltooligosaccharide)(NFUNC_0037)
RequireA
TREY
(NRULE_0140)
Maltooligosyl trehalose synthaseSros_1602
TREZ
(NRULE_0141)
Malto-oligosyltrehalose trehalohydrolaseSros_1603
Participant 
GLGX
(NRULE_0139)
Glycogen debranching enzymeSros_6707 Sros_1601
Trehalose biosynthesis (from maltose)(NFUNC_0034)
RequireB
TRES
(NRULE_0128)
Trehalose synthaseSros_1630 Sros_8141
Trehalose biosynthesis (from NDP-glucose and glucose-6-phosphate)(NFUNC_0031)
RequireA
TPS
(NRULE_0119)
Trehalose-phosphate synthaseSros_6769
TPP
(NRULE_0120)
Trehalose-6-phosphate phosphataseSros_8924
Vitamin B6 biosynthesis (PdxS/PdxT pathway)(NFUNC_0059)
RequireA
PDXS
(NRULE_0206)
Pyridoxal biosynthesis lyase PdxSSros_6121
PDXT
(NRULE_0207)
Glutamine amidotransferase subunit PdxTSros_6117

Genomic Overview

BioProject IDPRJNA21083
Locus_tagSROS
INSDC entriesCP001814
Sequence statusComplete
Current status
Contig number2
Size(bp) 10,369,518
Gene 8,975
Finishing goal
Assembly method
Coverage
Technology
Reference
  • Complete genome sequence of Streptosporangium roseum type strain (NI 9100). (Stand Genomic Sci. 2010) PMID: 21304675

Data Download

Genomic nucleotide sequence Nucleotide sequence of the coding regions Translation of the coding sequneces List of genes / ORFs
FASTA
gz
FASTA
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FASTA
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TSV
uncompressed
3.0 MB 2.5 MB 1.8 MB 701.3 KB