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Microbe : Bacillus pseudomycoides

Microbe Description

NBRC No. 101232
Scientific name Bacillus pseudomycoides
Synonymous name Not assigned
History NRRL B-617 <- NRRL (L.J. Wickerham)
Other culture collection No. CIP 105700=DSM 12442=JCM 12231=KCTC 3862=LMG 18993=NRRL B-617
Other No.
Reference
9734060
Bacillus pseudomycoides sp. nov. (Int J Syst Bacteriol. 1998)

Functional Potential >>Details

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TypePattern Component Gene CDS
Alanine racemization(NFUNC_0063)
RequireA
ALR
(NRULE_0228)
Alanine racemasebpmyx0001_1940 bpmyx0001_18700
Aminoglycoside resistance (by aminoglycoside N-acetyltransferase)(NFUNC_0041)
RequireA
AAC3
(NRULE_0149)
Aminoglycoside N(3')-acetyltransferasebpmyx0001_24800
Aminoglycoside resistance (by aminoglycoside O-nucleotidyltransferase)(NFUNC_0042)
RequireA
ANT6
(NRULE_0151)
Aminoglycoside 6-adenylyltransferasebpmyx0001_54090 bpmyx0001_17590
Aminoglycoside resistance (by aminoglycoside O-phosphotransferase)(NFUNC_0043)
RequireA
APH6
(NRULE_0155)
Streptomycin 6-kinasebpmyx0001_28490
Ampicillin resistance(NFUNC_0046)
RequireA
BLAA
(NRULE_0122)
Beta-lactamase class Abpmyx0001_49550
Participant 
BLAB
(NRULE_0123)
Metallo-beta-lactamasebpmyx0001_25330
Anthranilate biosynthesis(NFUNC_0038)
RequireA
GLAT
(NRULE_0142)
Glutamine amidotransferasebpmyx0001_570 bpmyx0001_10870
TRPE
(NRULE_0143)
Anthranilate synthase component Ibpmyx0001_10860 bpmyx0001_560
Arginine degradation(NFUNC_0074)
RequireA
ARGI
(NRULE_0239)
Arginasebpmyx0001_53160
Aromatic azo compounds degradation(NFUNC_0073)
RequireA
AZOR
(NRULE_0236)
FMN-dependent NADH-azoreductasebpmyx0001_48520 bpmyx0001_8310 bpmyx0001_19910 bpmyx0001_56690
B
AZR
(NRULE_0237)
NADPH azoreductasebpmyx0001_20140
Arsenical resistance(NFUNC_0004)
RequireE
ARSB2
(NRULE_0016)
Arsenite resistance protein ArsBbpmyx0001_14880
ARSC2
(NRULE_0018)
Arsenate reductasebpmyx0001_14890
Participant 
ARSA
(NRULE_0014)
Arsenical pump-driving ATPasebpmyx0001_2530
Bacitracin resistance(NFUNC_0022)
RequireA
UPPP
(NRULE_0097)
Undecaprenyl-diphosphatasebpmyx0001_12550 bpmyx0001_2140 bpmyx0001_23030
Beta-lactam antibiotic resistance(NFUNC_0033)
RequireA
BLAA
(NRULE_0122)
Beta-lactamase class Abpmyx0001_49550
B
BLAB
(NRULE_0123)
Metallo-beta-lactamasebpmyx0001_25330
Bioplastic synthesis(NFUNC_0001)
RequireC
PHAR
(NRULE_0013)
Poly(3-hydroxyalkanoate) polymerase PhaR subunitbpmyx0001_11790
PHAC2
(NRULE_0373)
Poly(3-hydroxyalkanoate) polymerase PhaC subunitbpmyx0001_11810
Participant 
PHAB
(NRULE_0011)
Acetoacetyl-CoA reductasebpmyx0001_11800
 
PHAP2
(NRULE_0375)
Phasinbpmyx0001_11770
Biotin biosynthesis(NFUNC_0051)
RequireA
BIOF
(NRULE_0182)
8-amino-7-oxononanoate synthasebpmyx0001_36000
BIOA
(NRULE_0183)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferasebpmyx0001_36020
BIOD
(NRULE_0184)
ATP-dependent dethiobiotin synthetase BioDbpmyx0001_36010
BIOB
(NRULE_0185)
Biotin synthasebpmyx0001_35970
Fosfomycin resistance(NFUNC_0023)
RequireB
FOSB
(NRULE_0099)
Metallothiol transferase FosBbpmyx0001_18210
Macrolide antibiotic resistance(NFUNC_0045)
RequireD
ERE
(NRULE_0168)
Erythromycin esterasebpmyx0001_22920 bpmyx0001_22910
E
MPH
(NRULE_0169)
Macrolide 2'-phosphotransferasebpmyx0001_23090
Metal-binding protein(NFUNC_0105)
RequireA
MOP
(NRULE_0322)
Putative molybdenum-binding proteinbpmyx0001_34960
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinbpmyx0001_4250 bpmyx0001_1490 bpmyx0001_39670
D
MNTR
(NRULE_0327)
DtxR family transcriptional regulator MntRbpmyx0001_36880
Molybdate transport (ABC transporter)(NFUNC_0097)
RequireA
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinbpmyx0001_1490 bpmyx0001_39670 bpmyx0001_4250
Participant 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinbpmyx0001_1480
(R)-pantothenate biosynthesis(NFUNC_0030)
RequireA
PAND
(NRULE_0115)
Aspartate 1-decarboxylasebpmyx0001_14180
PANB
(NRULE_0116)
3-methyl-2-oxobutanoate hydroxymethyltransferasebpmyx0001_14160
PANE
(NRULE_0117)
2-dehydropantoate 2-reductasebpmyx0001_33950 bpmyx0001_16730
PANC
(NRULE_0118)
Pantothenate synthetasebpmyx0001_14170
Penicillin resistance(NFUNC_0047)
RequireA
BLAA
(NRULE_0122)
Beta-lactamase class Abpmyx0001_49550
Participant 
BLAB
(NRULE_0123)
Metallo-beta-lactamasebpmyx0001_25330
Phenol degradation(NFUNC_0028)
RequireB
PHEA1
(NRULE_0083)
Aromatic ring hydroxylasebpmyx0001_18560
Participant 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinbpmyx0001_1560 bpmyx0001_14000 bpmyx0001_2980
 
FADR1
(NRULE_0101)
NADH-dependent flavin reductasebpmyx0001_22050 bpmyx0001_47640
Phytic acid hydrolysis(NFUNC_0085)
RequireA
PHYT
(NRULE_0258)
3-phytasebpmyx0001_54320
Riboflavin biosynthesis(NFUNC_0058)
RequireA
RIBB
(NRULE_0200)
3,4-dihydroxy-2-butanone 4-phosphate synthasebpmyx0001_35930
RIBA
(NRULE_0201)
GTP cyclohydrolase-2bpmyx0001_35930
RIBD
(NRULE_0202)
Riboflavin biosynthesis protein RibDbpmyx0001_35910
RIBH
(NRULE_0203)
6,7-dimethyl-8-ribityllumazine synthasebpmyx0001_35940
RIBE
(NRULE_0204)
Riboflavin synthasebpmyx0001_35920
Participant 
RIBF
(NRULE_0205)
Riboflavin biosynthesis protein RibFbpmyx0001_32770
Streptogramin resistance(NFUNC_0027)
RequireA
VAT
(NRULE_0113)
Streptogramin A acetyltransferasebpmyx0001_22440
Streptomycin resistance(NFUNC_0054)
RequireA
ANT6
(NRULE_0151)
Aminoglycoside 6-adenylyltransferasebpmyx0001_54090 bpmyx0001_17590
C
APH6
(NRULE_0155)
Streptomycin 6-kinasebpmyx0001_28490
Uptake of osmoprotectant(NFUNC_0061)
RequireC
BCCT
(NRULE_0220)
BCCT family transporterbpmyx0001_57060
E
OPUE
(NRULE_0222)
Sodium/proline symporterbpmyx0001_10850
Vitamin B6 biosynthesis (PdxS/PdxT pathway)(NFUNC_0059)
RequireA
PDXS
(NRULE_0206)
Pyridoxal biosynthesis lyase PdxSbpmyx0001_40
PDXT
(NRULE_0207)
Glutamine amidotransferase subunit PdxTbpmyx0001_50

Genomic Overview

BioProject IDPRJNA29707
Locus_tag
INSDC entriesACMX01000000
Sequence statusWGS
Current status
Contig number305
Size(bp) 5,752,014
Gene 5,851
Finishing goal
Assembly method
Coverage8.5X
Technology
Reference
  • Genomic characterization of the Bacillus cereus sensu lato species: backdrop to the evolution of Bacillus anthracis. (Genome Res. 2012) PMID: 22645259

Data Download

Genomic nucleotide sequence Nucleotide sequence of the coding regions Translation of the coding sequneces List of genes / ORFs
FASTA
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FASTA
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FASTA
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TSV
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1.7 MB 1.4 MB 957.9 KB 458.0 KB