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微生物 : Brevibacterium linens

微生物株情報

NBRC番号 12170
学名 Brevibacterium linens
別名(シノニム) 該当データなし
由来 IFO 12170 <- ATCC 9174 <- R.S. Breed, 56i <- C.D. Kelly <- H. Weigmann
他保存機関番号 ATCC 9174=NCIMB 9910
他株番号 56i
参考文献
該当データなし

推定保有機能 >>詳細

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タイプパターン 構成遺伝子 該当CDS
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemaseBlinB_010200011941
Aminoglycoside resistance (by aminoglycoside O-phosphotransferase)(NFUNC_0043)
必須A
APH6
(NRULE_0155)
Streptomycin 6-kinaseBlinB_010200007675
Ampicillin resistance(NFUNC_0046)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class ABlinB_010200008960
Anthranilate biosynthesis(NFUNC_0038)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseBlinB_010200016782 BlinB_010200013316
TRPE
(NRULE_0143)
Anthranilate synthase component IBlinB_010200000600
Bacitracin resistance(NFUNC_0022)
必須A
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseBlinB_010200000155
Beta-lactam antibiotic resistance(NFUNC_0033)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class ABlinB_010200008960
Betaine biosynthesis (from choline)(NFUNC_0049)
必須C
CHOX
(NRULE_0178)
Choline oxidaseBlinB_010200007905
Ectoine biosynthesis(NFUNC_0056)
必須A
ECTB
(NRULE_0186)
Diaminobutyrate--2-oxoglutarate transaminaseBlinB_010200009577
ECTA
(NRULE_0187)
L-2,4-diaminobutyric acid acetyltransferaseBlinB_010200009582
ECTC
(NRULE_0188)
L-ectoine synthaseBlinB_010200009572
Hydroxyectoine biosynthesis(NFUNC_0057)
必須A
ECTD
(NRULE_0189)
Ectoine hydroxylaseBlinB_010200016497
任意 
ECTB
(NRULE_0186)
Diaminobutyrate--2-oxoglutarate transaminaseBlinB_010200009577
 
ECTA
(NRULE_0187)
L-2,4-diaminobutyric acid acetyltransferaseBlinB_010200009582
 
ECTC
(NRULE_0188)
L-ectoine synthaseBlinB_010200009572
Macrolide antibiotic resistance(NFUNC_0045)
必須E
MPH
(NRULE_0169)
Macrolide 2'-phosphotransferaseBlinB_010200017229
Metal-binding protein(NFUNC_0105)
必須A
MOP
(NRULE_0322)
Putative molybdenum-binding proteinBlinB_010200011996 BlinB_010200005279
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinBlinB_010200005274
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinBlinB_010200005274
任意 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinBlinB_010200005269
Penicillin resistance(NFUNC_0047)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class ABlinB_010200008960
Phenol degradation(NFUNC_0028)
必須C
PHEA2
(NRULE_0084)
Aromatic ring hydroxylaseBlinB_010200012311
任意 
FDR1
(NRULE_0032)
Oxygenase electron transfer componentBlinB_010200015032 BlinB_010200003734 BlinB_010200003824
 
FDX1
(NRULE_0034)
Putative Rieske-type ferredoxinBlinB_010200000390 BlinB_010200015817 BlinB_010200015027 BlinB_010200003819 BlinB_010200018605
 
FADR1
(NRULE_0101)
NADH-dependent flavin reductaseBlinB_010200007865 BlinB_010200012732 BlinB_010200013663
Streptomycin resistance(NFUNC_0054)
必須C
APH6
(NRULE_0155)
Streptomycin 6-kinaseBlinB_010200007675
Trehalose biosynthesis (from NDP-glucose and glucose-6-phosphate)(NFUNC_0031)
必須A
TPS
(NRULE_0119)
Trehalose-phosphate synthaseBlinB_010200014950
TPP
(NRULE_0120)
Trehalose-6-phosphate phosphataseBlinB_010200004324
Uptake of osmoprotectant(NFUNC_0061)
必須B
EHUB
(NRULE_0216)
Ectoine ABC transporter substrate-binding proteinBlinB_010200005489
EHUC
(NRULE_0217)
Ectoine ABC transporter permease proteinBlinB_010200005484
EHUD
(NRULE_0218)
Ectoine ABC transporter permease proteinBlinB_010200005479
EHUA
(NRULE_0219)
Ectoine ABC transporter ATP-binding proteinBlinB_010200005474
C
BCCT
(NRULE_0220)
BCCT family transporterBlinB_010200002507 BlinB_010200014418 BlinB_010200010222 BlinB_010200018166 BlinB_010200007900 BlinB_010200003232 BlinB_010200010137
E
OPUE
(NRULE_0222)
Sodium/proline symporterBlinB_010200017344
Vitamin B6 biosynthesis (PdxS/PdxT pathway)(NFUNC_0059)
必須A
PDXS
(NRULE_0206)
Pyridoxal biosynthesis lyase PdxSBlinB_010200017696
PDXT
(NRULE_0207)
Glutamine amidotransferase subunit PdxTBlinB_010200017701

ゲノム配列情報

BioProject IDPRJNA54109
ローカスタグ
INSDC entriesNZ_AAGP01000000
ステータスWGS
解析状況
コンティグ数76
サイズ(bp) 4,366,969
遺伝子数 4,044
フィニッシングゴール
アセンブル方法
冗長度
シーケンス方法
参考文献

データダウンロード

ゲノム塩基配列 CDS塩基配列 CDSアミノ酸変換配列 遺伝子/ORF リスト
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