English site

微生物 : Bacillus atrophaeus

微生物株情報

NBRC番号 13721
学名 Bacillus atrophaeus
別名（シノニム） 該当データなし
由来 IFO 13721 <- IFO (K. Imai, 9372-2, single colony isolate) <- ATCC 9372 <- N.R. Smith, 1221A <- Bacom Labs. <- C.R. Phillips <- E. McCoy
他保存機関番号 ATCC 9372=CIP 77.18=DSM 675=NBRC 16183=NCIB 8058=NCIMB 13498
他株番号 1221A=9372-2
参考文献
9651440
A simple phenylalanine method for detecting phenylketonuria in large populations of newborn infants, by Robert Guthrie and Ada Susi, Pediatrics, 1963;32:318-343. (Pediatrics. 1998)
10425781
Relationship of Bacillus subtilis clades associated with strains 168 and W23: a proposal for Bacillus subtilis subsp. subtilis subsp. nov. and Bacillus subtilis subsp. spizizenii subsp. nov. (Int J Syst Bacteriol. 1999)
11211269
Reclassification of bioindicator strains Bacillus subtilis DSM 675 and Bacillus subtilis DSM 2277 as Bacillus atrophaeus. (Int J Syst Evol Microbiol. 2001)

推定保有機能 >>詳細

Download
タイプパターン 構成遺伝子 該当CDS
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemaseBATRMS_17_01070 BATRMS_06_00270
Aminoglycoside resistance (by aminoglycoside O-nucleotidyltransferase)(NFUNC_0042)
必須A
ANT6
(NRULE_0151)
Aminoglycoside 6-adenylyltransferaseBATRMS_13_00670
Aminoglycoside resistance (by aminoglycoside O-phosphotransferase)(NFUNC_0043)
必須A
APH6
(NRULE_0155)
Streptomycin 6-kinaseBATRMS_10_04180
Ampicillin resistance(NFUNC_0046)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class ABATRMS_13_00950
任意 
BLAD
(NRULE_0125)
Beta-lactamase class DBATRMS_21_00040 BATRMS_04_00070
Anthranilate biosynthesis(NFUNC_0038)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseBATRMS_24_00520
TRPE
(NRULE_0143)
Anthranilate synthase component IBATRMS_17_02170
Arginine degradation(NFUNC_0074)
必須A
ARGI
(NRULE_0239)
ArginaseBATRMS_01_01700
Aromatic azo compounds degradation(NFUNC_0073)
必須A
AZOR
(NRULE_0236)
FMN-dependent NADH-azoreductaseBATRMS_17_00430 BATRMS_15_00210
B
AZR
(NRULE_0237)
NADPH azoreductaseBATRMS_10_08510
Arsenical resistance(NFUNC_0004)
必須B
ARSB1
(NRULE_0015)
Arsenical pump membrane proteinBATRMS_04_00270
ARSC2
(NRULE_0018)
Arsenate reductaseBATRMS_04_00260
Bacitracin resistance(NFUNC_0022)
必須A
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseBATRMS_20_00180
Beta-lactam antibiotic resistance(NFUNC_0033)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class ABATRMS_13_00950
D
BLAD
(NRULE_0125)
Beta-lactamase class DBATRMS_04_00070 BATRMS_21_00040
Betaine biosynthesis (from choline)(NFUNC_0049)
必須B
GBSB
(NRULE_0176)
Alcohol dehydrogenaseBATRMS_20_00080
BETB
(NRULE_0177)
Betaine aldehyde dehydrogenaseBATRMS_20_00090
Biotin biosynthesis(NFUNC_0051)
必須A
BIOF
(NRULE_0182)
8-amino-7-oxononanoate synthaseBATRMS_10_00630 BATRMS_05_00780
BIOA
(NRULE_0183)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferaseBATRMS_05_00770
BIOD
(NRULE_0184)
ATP-dependent dethiobiotin synthetase BioDBATRMS_05_00790
BIOB
(NRULE_0185)
Biotin synthaseBATRMS_05_00800
Chloramphenicol resistance(NFUNC_0025)
必須A
CAT1
(NRULE_0107)
Chloramphenicol acetyltransferaseBATRMS_10_00620
Fosfomycin resistance(NFUNC_0023)
必須B
FOSB
(NRULE_0099)
Metallothiol transferase FosBBATRMS_01_00220
Macrolide antibiotic resistance(NFUNC_0045)
必須D
ERE
(NRULE_0168)
Erythromycin esteraseBATRMS_16_00270
E
MPH
(NRULE_0169)
Macrolide 2'-phosphotransferaseBATRMS_16_00480
Metal-binding protein(NFUNC_0105)
必須A
MOP
(NRULE_0322)
Putative molybdenum-binding proteinBATRMS_01_00080 BATRMS_11_00990
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinBATRMS_11_01840 BATRMS_17_05340
D
MNTR
(NRULE_0327)
DtxR family transcriptional regulator MntRBATRMS_17_04870
Milk clotting(NFUNC_0072)
必須A
MCP
(NRULE_0235)
Milk-clotting proteaseBATRMS_10_02980
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinBATRMS_17_05340 BATRMS_11_01840
任意 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinBATRMS_11_01850
(R)-pantothenate biosynthesis(NFUNC_0030)
必須A
PAND
(NRULE_0115)
Aspartate 1-decarboxylaseBATRMS_17_01890
PANB
(NRULE_0116)
3-methyl-2-oxobutanoate hydroxymethyltransferaseBATRMS_17_01910
PANE
(NRULE_0117)
2-dehydropantoate 2-reductaseBATRMS_10_02530 BATRMS_17_06220 BATRMS_10_03260
PANC
(NRULE_0118)
Pantothenate synthetaseBATRMS_17_01900
Penicillin resistance(NFUNC_0047)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class ABATRMS_13_00950
B
BLAD
(NRULE_0125)
Beta-lactamase class DBATRMS_04_00070 BATRMS_21_00040
Phytic acid hydrolysis(NFUNC_0085)
必須A
PHYT
(NRULE_0258)
3-phytaseBATRMS_17_01050
Riboflavin biosynthesis(NFUNC_0058)
必須A
RIBB
(NRULE_0200)
3,4-dihydroxy-2-butanone 4-phosphate synthaseBATRMS_17_02760
RIBA
(NRULE_0201)
GTP cyclohydrolase-2BATRMS_17_02760
RIBD
(NRULE_0202)
Riboflavin biosynthesis protein RibDBATRMS_17_02780
RIBH
(NRULE_0203)
6,7-dimethyl-8-ribityllumazine synthaseBATRMS_17_02750
RIBE
(NRULE_0204)
Riboflavin synthaseBATRMS_17_02770
任意 
RIBF
(NRULE_0205)
Riboflavin biosynthesis protein RibFBATRMS_10_00950
Streptomycin resistance(NFUNC_0054)
必須A
ANT6
(NRULE_0151)
Aminoglycoside 6-adenylyltransferaseBATRMS_13_00670
C
APH6
(NRULE_0155)
Streptomycin 6-kinaseBATRMS_10_04180
Uptake of osmoprotectant(NFUNC_0061)
必須A
OPUAC
(NRULE_0213)
Osmoprotectant ABC transporter substrate-binding proteinBATRMS_14_00020 BATRMS_16_00940 BATRMS_15_00040
OPUAB
(NRULE_0214)
Osmoprotectant ABC transporter permease proteinBATRMS_15_00030 BATRMS_14_00010 BATRMS_14_00030 BATRMS_15_00050 BATRMS_16_00930
OPUAA
(NRULE_0215)
Osmoprotectant ABC transporter ATP-binding proteinBATRMS_27_00130 BATRMS_15_00020 BATRMS_14_00040 BATRMS_16_00920
C
BCCT
(NRULE_0220)
BCCT family transporterBATRMS_05_00930
E
OPUE
(NRULE_0222)
Sodium/proline symporterBATRMS_18_00810 BATRMS_16_01140
Vitamin B6 biosynthesis (PdxS/PdxT pathway)(NFUNC_0059)
必須A
PDXS
(NRULE_0206)
Pyridoxal biosynthesis lyase PdxSBATRMS_03_00130
PDXT
(NRULE_0207)
Glutamine amidotransferase subunit PdxTBATRMS_03_00120

ゲノム配列情報

BioProject IDPRJNA37683
ローカスタグBATRMS
INSDC entriesAEFM01000000
ステータスWGS
解析状況
コンティグ数28
サイズ(bp) 4,106,324
遺伝子数 0
フィニッシングゴール
アセンブル方法Newbler v. 2.0.01.14
冗長度44x
シーケンス方法
  • 454 FLX
参考文献
  • Genomic signatures of strain selection and enhancement in Bacillus atrophaeus var. globigii, a historical biowarfare simulant. (PLoS One. 2011) PMID: 21464989

データダウンロード

ゲノム塩基配列 CDS塩基配列 CDSアミノ酸変換配列 遺伝子/ORF リスト
FASTA
gz		 FASTA
gz		 FASTA
gz		 TSV
uncompressed
1.2 MB 1.1 MB 770.4 KB 344.4 KB