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微生物 : Kitasatospora setae

微生物株情報

NBRC番号 14216
学名 Kitasatospora setae
別名(シノニム) Kitasatosporia setae (sic)
Kitasatosporia setalba (sic)
Kitasatosporia setensis (sic)
Streptomyces setae
由来 IFO 14216 <- Kitasato Inst. (Y. Takahashi, KM-6054)
他保存機関番号 ATCC 33774=DSM 43861=JCM 3304=NRRL B-16185=VKM Ac-900
他株番号 KCC A-0304=KM-6054?
参考文献
1371059
Taxonomic status of Kitasatosporia, and proposed unification with Streptomyces on the basis of phenotypic and 16S rRNA analysis and emendation of Streptomyces Waksman and Henrici 1943, 339AL. (Int J Syst Bacteriol. 1992)
7142001
Kitasatosporia, a new genus of the order Actinomycetales. (J Antibiot (Tokyo). 1982)
7333980
Type of diaminopimelic acid different in aerial and vegetative mycelia of setamycin-producing actinomycete KM-6054. (J Antibiot (Tokyo). 1981)
21059706
Genome sequence of Kitasatospora setae NBRC 14216T: an evolutionary snapshot of the family Streptomycetaceae. (DNA Res. 2010)

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タイプパターン 構成遺伝子 該当CDS
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemaseKSE_31220
Aminoglycoside resistance (by aminoglycoside N-acetyltransferase)(NFUNC_0041)
必須A
AAC3
(NRULE_0149)
Aminoglycoside N(3')-acetyltransferaseKSE_44730
Aminoglycoside resistance (by aminoglycoside O-nucleotidyltransferase)(NFUNC_0042)
必須C
ANT2
(NRULE_0153)
2''-aminoglycoside nucleotidyltransferaseKSE_71230
Aminoglycoside resistance (by aminoglycoside O-phosphotransferase)(NFUNC_0043)
必須A
APH6
(NRULE_0155)
Streptomycin 6-kinaseKSE_53020
Ampicillin resistance(NFUNC_0046)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class AKSE_57690
Anthranilate biosynthesis(NFUNC_0038)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseKSE_70670 KSE_39370
TRPE
(NRULE_0143)
Anthranilate synthase component IKSE_20550
Bacitracin resistance(NFUNC_0022)
必須A
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseKSE_50650 KSE_15960
Beta-lactam antibiotic resistance(NFUNC_0033)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class AKSE_57690
C
BLAC
(NRULE_0124)
Beta-lactamase class CKSE_08360
Bioplastic degradation(NFUNC_0015)
必須B
PHAZ2
(NRULE_0080)
Poly(3-hydroxyalkanoate) depolymeraseKSE_73950
Cephalosporin resistance(NFUNC_0048)
必須A
BLAC
(NRULE_0124)
Beta-lactamase class CKSE_08360
任意 
BLAA
(NRULE_0122)
Beta-lactamase class AKSE_57690
GABA biosynthesis(NFUNC_0066)
必須A
GAD
(NRULE_0231)
Glutamate decarboxylaseKSE_25120
Gentamicin resistance(NFUNC_0053)
必須A
ANT2
(NRULE_0153)
2''-aminoglycoside nucleotidyltransferaseKSE_71230
任意 
AAC3
(NRULE_0149)
Aminoglycoside N(3')-acetyltransferaseKSE_44730
Kanamycin resistance(NFUNC_0052)
必須B
ANT2
(NRULE_0153)
2''-aminoglycoside nucleotidyltransferaseKSE_71230
任意 
AAC3
(NRULE_0149)
Aminoglycoside N(3')-acetyltransferaseKSE_44730
Macrolide antibiotic resistance(NFUNC_0045)
必須B
RLMA
(NRULE_0165)
23S rRNA (guanine-N(1))-methyltransferaseKSE_26550
D
ERE
(NRULE_0168)
Erythromycin esteraseKSE_15000
F
MGT
(NRULE_0170)
Macrolide glycosyltransferaseKSE_23310
Metal-binding protein(NFUNC_0105)
必須A
MOP
(NRULE_0322)
Putative molybdenum-binding proteinKSE_62330 KSE_72670
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinKSE_62350
F
SOXR
(NRULE_0329)
Redox-sensitive transcriptional activator SoxRKSE_73380 KSE_20120
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinKSE_62350
任意 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinKSE_62340
(R)-pantothenate biosynthesis(NFUNC_0030)
必須A
PAND
(NRULE_0115)
Aspartate 1-decarboxylaseKSE_34000 KSE_70480
PANB
(NRULE_0116)
3-methyl-2-oxobutanoate hydroxymethyltransferaseKSE_23520
PANE
(NRULE_0117)
2-dehydropantoate 2-reductaseKSE_15110 KSE_02720
PANC
(NRULE_0118)
Pantothenate synthetaseKSE_01480 KSE_33990
Penicillin resistance(NFUNC_0047)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class AKSE_57690
Streptomycin resistance(NFUNC_0054)
必須C
APH6
(NRULE_0155)
Streptomycin 6-kinaseKSE_53020
Trehalose biosynthesis (from maltooligosaccharide)(NFUNC_0037)
必須A
TREY
(NRULE_0140)
Maltooligosyl trehalose synthaseKSE_20080
TREZ
(NRULE_0141)
Malto-oligosyltrehalose trehalohydrolaseKSE_20090
任意 
GLGX
(NRULE_0139)
Glycogen debranching enzymeKSE_20060 KSE_50810
Trehalose biosynthesis (from maltose)(NFUNC_0034)
必須B
TRES
(NRULE_0128)
Trehalose synthaseKSE_75850t KSE_00890t KSE_50680
Uptake of osmoprotectant(NFUNC_0061)
必須C
BCCT
(NRULE_0220)
BCCT family transporterKSE_64100
Vitamin B6 biosynthesis (PdxS/PdxT pathway)(NFUNC_0059)
必須A
PDXS
(NRULE_0206)
Pyridoxal biosynthesis lyase PdxSKSE_14480
PDXT
(NRULE_0207)
Glutamine amidotransferase subunit PdxTKSE_14470

ゲノム配列情報

BioProject IDPRJDA19951
ローカスタグKSE
INSDC entriesAP010968
ステータスComplete
解析状況
コンティグ数1
サイズ(bp) 8,783,278
遺伝子数 7,569
フィニッシングゴール
アセンブル方法
冗長度
シーケンス方法
参考文献
  • Genome sequence of Kitasatospora setae NBRC 14216T: an evolutionary snapshot of the family Streptomycetaceae. (DNA Res. 2010) PMID: 21059706

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ゲノム塩基配列 CDS塩基配列 CDSアミノ酸変換配列 遺伝子/ORF リスト
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