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微生物 : Saccharomonospora azurea

微生物株情報

NBRC番号 14651
学名 Saccharomonospora azurea
別名（シノニム） 該当データなし
由来 IFO 14651 <- SIIA (R.-M. Hu, 86128, NA-128)
他保存機関番号 ATCC 43670=DSM 44631=JCM 7551=SIIA 86128
他株番号 86128=NA-128
参考文献
該当データなし

推定保有機能 >>詳細

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タイプパターン 構成遺伝子 該当CDS
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemaseSacazDRAFT_03263 SacazDRAFT_00334
Aminoglycoside resistance (by aminoglycoside N-acetyltransferase)(NFUNC_0041)
必須A
AAC3
(NRULE_0149)
Aminoglycoside N(3')-acetyltransferaseSacazDRAFT_03679
Aminoglycoside resistance (by aminoglycoside O-phosphotransferase)(NFUNC_0043)
必須A
APH6
(NRULE_0155)
Streptomycin 6-kinaseSacazDRAFT_02834
B
APH3
(NRULE_0156)
Aminoglycoside 3'-phosphotransferaseSacazDRAFT_03149
C
APH7
(NRULE_0157)
Hygromycin-B 7''-O-kinaseSacazDRAFT_03696
Ampicillin resistance(NFUNC_0046)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class ASacazDRAFT_00164
Anthranilate biosynthesis(NFUNC_0038)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseSacazDRAFT_02810
TRPE
(NRULE_0143)
Anthranilate synthase component ISacazDRAFT_01529
Bacitracin resistance(NFUNC_0022)
必須A
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseSacazDRAFT_00685
Beta-lactam antibiotic resistance(NFUNC_0033)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class ASacazDRAFT_00164
Betaine biosynthesis (from choline)(NFUNC_0049)
必須A
BETA
(NRULE_0175)
Choline dehydrogenaseSacazDRAFT_01917
C
CHOX
(NRULE_0178)
Choline oxidaseSacazDRAFT_01115
Bioplastic degradation(NFUNC_0015)
必須B
PHAZ2
(NRULE_0080)
Poly(3-hydroxyalkanoate) depolymeraseSacazDRAFT_01924
Ectoine biosynthesis(NFUNC_0056)
必須A
ECTB
(NRULE_0186)
Diaminobutyrate--2-oxoglutarate transaminaseSacazDRAFT_02245
ECTA
(NRULE_0187)
L-2,4-diaminobutyric acid acetyltransferaseSacazDRAFT_02246
ECTC
(NRULE_0188)
L-ectoine synthaseSacazDRAFT_02244
Hydroxyectoine biosynthesis(NFUNC_0057)
必須A
ECTD
(NRULE_0189)
Ectoine hydroxylaseSacazDRAFT_02243
任意 
ECTB
(NRULE_0186)
Diaminobutyrate--2-oxoglutarate transaminaseSacazDRAFT_02245
 
ECTA
(NRULE_0187)
L-2,4-diaminobutyric acid acetyltransferaseSacazDRAFT_02246
 
ECTC
(NRULE_0188)
L-ectoine synthaseSacazDRAFT_02244
Hygromycin resistance(NFUNC_0055)
必須A
APH7
(NRULE_0157)
Hygromycin-B 7''-O-kinaseSacazDRAFT_03696
Kanamycin resistance(NFUNC_0052)
必須C
APH3
(NRULE_0156)
Aminoglycoside 3'-phosphotransferaseSacazDRAFT_03149
任意 
AAC3
(NRULE_0149)
Aminoglycoside N(3')-acetyltransferaseSacazDRAFT_03679
Macrolide antibiotic resistance(NFUNC_0045)
必須B
RLMA
(NRULE_0165)
23S rRNA (guanine-N(1))-methyltransferaseSacazDRAFT_03819
F
MGT
(NRULE_0170)
Macrolide glycosyltransferaseSacazDRAFT_02093
Mercury resistance(NFUNC_0005)
必須A
MERA
(NRULE_0008)
Mercuric reductaseSacazDRAFT_00543
Metal-binding protein(NFUNC_0105)
必須A
MOP
(NRULE_0322)
Putative molybdenum-binding proteinSacazDRAFT_02178 SacazDRAFT_00310 SacazDRAFT_02181
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinSacazDRAFT_02180
F
SOXR
(NRULE_0329)
Redox-sensitive transcriptional activator SoxRSacazDRAFT_03958
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinSacazDRAFT_02180
任意 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinSacazDRAFT_02179
Penicillin resistance(NFUNC_0047)
必須A
BLAA
(NRULE_0122)
Beta-lactamase class ASacazDRAFT_00164
Streptogramin resistance(NFUNC_0027)
必須B
VGB
(NRULE_0114)
Virginiamycin B lyaseSacazDRAFT_03268
Streptomycin resistance(NFUNC_0054)
必須C
APH6
(NRULE_0155)
Streptomycin 6-kinaseSacazDRAFT_02834
任意 
APH3
(NRULE_0156)
Aminoglycoside 3'-phosphotransferaseSacazDRAFT_03149
Trehalose biosynthesis (from NDP-glucose and glucose-6-phosphate)(NFUNC_0031)
必須A
TPS
(NRULE_0119)
Trehalose-phosphate synthaseSacazDRAFT_02276
TPP
(NRULE_0120)
Trehalose-6-phosphate phosphataseSacazDRAFT_02277
Uptake of osmoprotectant(NFUNC_0061)
必須B
EHUB
(NRULE_0216)
Ectoine ABC transporter substrate-binding proteinSacazDRAFT_01697
EHUC
(NRULE_0217)
Ectoine ABC transporter permease proteinSacazDRAFT_01702
EHUD
(NRULE_0218)
Ectoine ABC transporter permease proteinSacazDRAFT_01701 SacazDRAFT_01696
EHUA
(NRULE_0219)
Ectoine ABC transporter ATP-binding proteinSacazDRAFT_01700
C
BCCT
(NRULE_0220)
BCCT family transporterSacazDRAFT_01027 SacazDRAFT_02880 SacazDRAFT_02836 SacazDRAFT_01916
Vitamin B6 biosynthesis (PdxS/PdxT pathway)(NFUNC_0059)
必須A
PDXS
(NRULE_0206)
Pyridoxal biosynthesis lyase PdxSSacazDRAFT_04507
PDXT
(NRULE_0207)
Glutamine amidotransferase subunit PdxTSacazDRAFT_04511

ゲノム配列情報

BioProject IDPRJNA62037
ローカスタグSACAZDRAFT
INSDC entriesAGIU02000000
ステータスWGS
解析状況Improved High-Quality Draft
コンティグ数96
サイズ(bp) 4,754,352
遺伝子数 4,376
フィニッシングゴールImproved High-Quality Draft
アセンブル方法Newbler v. 2.3
冗長度30x
シーケンス方法
  • 454
  • Illumina
参考文献
  • Genome sequence of the soil bacterium Saccharomonospora azurea type strain (NA-128(T)). (Stand Genomic Sci. 2012) PMID: 22768365

データダウンロード

ゲノム塩基配列 CDS塩基配列 CDSアミノ酸変換配列 遺伝子/ORF リスト
FASTA
gz		 FASTA
gz		 FASTA
gz		 TSV
uncompressed
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