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微生物 : Magnetospirillum magnetotacticum

微生物株情報

NBRC番号 15272
学名 Magnetospirillum magnetotacticum
別名(シノニム) Aquaspirillum magnetotacticum
由来 IFO 15272 <- DSM 3856 <- ATCC 31632 <- R.P. Blakemore, MS-1
他保存機関番号 ATCC 31632=DSM 3856=IAM 14723=JCM 21281=LMG 10894
他株番号 MS-1
参考文献
500569
Isolation and pure culture of a freshwater magnetic spirillum in chemically defined medium. (J Bacteriol. 1979)

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タイプパターン 構成遺伝子 該当CDS
Alanine racemization(NFUNC_0063)
必須A
ALR
(NRULE_0228)
Alanine racemaseMagn03008599
Aminoglycoside resistance (by aminoglycoside O-phosphotransferase)(NFUNC_0043)
必須A
APH6
(NRULE_0155)
Streptomycin 6-kinaseMagn03009262
Anthranilate biosynthesis(NFUNC_0038)
必須A
GLAT
(NRULE_0142)
Glutamine amidotransferaseMagn03002058 Magn03009691
TRPE
(NRULE_0143)
Anthranilate synthase component IMagn03009752
Arsenical resistance(NFUNC_0004)
必須D
ARSB2
(NRULE_0016)
Arsenite resistance protein ArsBMagn03006265 Magn03009433 Magn03009513
ARSC1
(NRULE_0017)
Arsenate reductaseMagn03010916 Magn03004639 Magn03009434 Magn03009514
E
ARSB2
(NRULE_0016)
Arsenite resistance protein ArsBMagn03006265 Magn03009513 Magn03009433
ARSC2
(NRULE_0018)
Arsenate reductaseMagn03009431 Magn03009432 Magn03009511 Magn03009512
任意 
ARSA
(NRULE_0014)
Arsenical pump-driving ATPaseMagn03009436 Magn03009516
 
ARSD
(NRULE_0020)
Arsenical resistance operon trans-acting repressor ArsDMagn03009435 Magn03009515
Bacitracin resistance(NFUNC_0022)
必須A
UPPP
(NRULE_0097)
Undecaprenyl-diphosphataseMagn03008318 Magn03008491 Magn03005886
Beta-lactam antibiotic resistance(NFUNC_0033)
必須D
BLAD
(NRULE_0125)
Beta-lactamase class DMagn03010205
Bioplastic degradation(NFUNC_0015)
必須A
PHAZ1
(NRULE_0023)
Intracellular poly(3-hydroxyalkanoate) depolymeraseMagn03005553 Magn03010089 Magn03006977
B
PHAZ2
(NRULE_0080)
Poly(3-hydroxyalkanoate) depolymeraseMagn03002533
Metal-binding protein(NFUNC_0105)
必須A
MOP
(NRULE_0322)
Putative molybdenum-binding proteinMagn03005861 Magn03006196 Magn03010296 Magn03008379 Magn03008650 Magn03005024 Magn03009350
B
MODE
(NRULE_0323)
Putative molybdate-dependent transcriptional regulatorMagn03009350
C
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinMagn03005026 Magn03010295 Magn03010709 Magn03008647 Magn03008463 Magn03005025 Magn03000299
E
CUER
(NRULE_0328)
Copper-responsive transcriptional regulator CueRMagn03009758
J
SMTA
(NRULE_0009)
MetallothioneinMagn03004974
Metallothionein(NFUNC_0006)
必須A
SMTA
(NRULE_0009)
MetallothioneinMagn03004974
Molybdate transport (ABC transporter)(NFUNC_0097)
必須A
MODA
(NRULE_0324)
Molybdate ABC transporter substrate-binding proteinMagn03008463 Magn03000299 Magn03005025 Magn03005026 Magn03008647 Magn03010295 Magn03010709
任意 
MODE
(NRULE_0323)
Putative molybdate-dependent transcriptional regulatorMagn03009350
 
MODB
(NRULE_0325)
Molybdate ABC transporter permease proteinMagn03002548 Magn03008378
 
MODC
(NRULE_0326)
Molybdate ABC transporter ATP-binding proteinMagn03006196 Magn03008379
(R)-pantothenate biosynthesis(NFUNC_0030)
必須A
PAND
(NRULE_0115)
Aspartate 1-decarboxylaseMagn03010092
PANB
(NRULE_0116)
3-methyl-2-oxobutanoate hydroxymethyltransferaseMagn03010403 Magn03006954
PANE
(NRULE_0117)
2-dehydropantoate 2-reductaseMagn03007461
PANC
(NRULE_0118)
Pantothenate synthetaseMagn03010402
Penicillin resistance(NFUNC_0047)
必須B
BLAD
(NRULE_0125)
Beta-lactamase class DMagn03010205
Pyrroloquinoline quinone biosynthesis(NFUNC_0020)
必須A
PQQC
(NRULE_0092)
Pyrroloquinoline-quinone synthaseMagn03006481 Magn03005047 Magn03007676
任意 
PQQB
(NRULE_0091)
Coenzyme PQQ synthesis protein BMagn03007677
 
PQQE
(NRULE_0094)
Coenzyme PQQ synthesis protein EMagn03009729
Riboflavin biosynthesis(NFUNC_0058)
必須A
RIBB
(NRULE_0200)
3,4-dihydroxy-2-butanone 4-phosphate synthaseMagn03009110 Magn03005825
RIBA
(NRULE_0201)
GTP cyclohydrolase-2Magn03009111 Magn03010469 Magn03009110 Magn03005825
RIBD
(NRULE_0202)
Riboflavin biosynthesis protein RibDMagn03009108
RIBH
(NRULE_0203)
6,7-dimethyl-8-ribityllumazine synthaseMagn03007010 Magn03009112
RIBE
(NRULE_0204)
Riboflavin synthaseMagn03004371 Magn03003352 Magn03009109
任意 
RIBF
(NRULE_0205)
Riboflavin biosynthesis protein RibFMagn03010801 Magn03003723
Streptomycin resistance(NFUNC_0054)
必須C
APH6
(NRULE_0155)
Streptomycin 6-kinaseMagn03009262

ゲノム配列情報

BioProject IDPRJNA54085
ローカスタグMagn
INSDC entriesNZ_AAAP01000000
ステータスWGS
解析状況
コンティグ数3880
サイズ(bp) 9,211,536
遺伝子数 10,119
フィニッシングゴール
アセンブル方法
冗長度
シーケンス方法
参考文献

データダウンロード

ゲノム塩基配列 CDS塩基配列 CDSアミノ酸変換配列 遺伝子/ORF リスト
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